RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF517Q6ZMY9 492 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ACBD7Q8N6N7 88 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 NPEPL1Q8NDH3 523 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR10G3Q8NGC4 313 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR8K3Q8NH51 312 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ZMYND19Q96E35 227 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 Q96M85 177 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 LRFN5Q96NI6 719 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 DDOQ99489 341 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CMKLR1Q99788 373 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CDADC1Q9BWV3 514 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 AKIP1Q9NQ31 210 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 MED11Q9P086 117 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 KLHL21Q9UJP4 597 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 NXT1Q9UKK6 140 aaKnown RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 LOXL2Q9Y4K0 774 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CNTRLQ7Z7A1 2325 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 LOC102723996A0A087X1L8 192 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TMED7-TICAM2A0A0A6YYA0 188 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TEX13CA0A0J9YWL9 993 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 OR6C68A6NDL8 312 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 C9orf172C9J069 976 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 C9J4A7 227 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 MASP2O00187 686 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 BGLAPP02818 100 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 F13BP05160 661 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 SBK2P0C263 348 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 PRKCAP17252 672 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 BTF3P20290 206 aaKnown RBP8.34□□□□□ -1.07
ATG4A-202ENST00000345734 RCVRNP35243 200 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 POLR2HP52434 150 aaKnown RBP8.34□□□□□ -1.07
ATG4A-202ENST00000345734 HCCSP53701 268 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 CTXN1P60606 82 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 RPL18Q07020 188 aaKnown RBP8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TPBGQ13641 420 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ALG10Q5BKT4 473 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ADGRG3Q86Y34 549 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 KLBQ86Z14 1044 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ELP5Q8TE02 316 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 SMPDL3BQ92485 455 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 UFD1Q92890 307 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TMCO6Q96DC7 493 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 GPX7Q96SL4 187 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-202ENST00000345734 PTDSS2Q9BVG9 487 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 DEFB126Q9BYW3 111 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 OR11A1Q9GZK7 315 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ASB6Q9NWX5 421 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TAS2R10Q9NYW0 307 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TMED7Q9Y3B3 224 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF318Q5VUA4 2279 aa8.34□□□□□ -1.07
ATG4A-202ENST00000345734 TRAV36DV7A0A075B6V5 113 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 DAPL1A0PJW8 107 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ARPC3O15145 178 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CD14P08571 375 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CYC1P08574 325 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 COX6A1P12074 109 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 IFNGR1P15260 489 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 UQCRC1P31930 480 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 PTGS2P35354 604 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 PTGDSP41222 190 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CDKN2AP42771 156 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 IFITM2Q01629 132 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF404Q494X3 552 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ARMC4Q5T2S8 1044 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 LEG1Q6P5S2 330 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ARSKQ6UWY0 536 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 FAM122BQ7Z309 247 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 GRINAQ7Z429 371 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 NAXDQ8IW45 347 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 MFSD4AQ8N468 514 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RFLNBQ8N5W9 214 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 OR52N1Q8NH53 320 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SLC25A36Q96CQ1 311 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF486Q96H40 463 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 C1orf159Q96HA4 380 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 TTTY10Q9BZA0 68 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 NEK6Q9HC98 313 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ISYNA1Q9NPH2 558 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 TXNL4BQ9NX01 149 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 KLRF1Q9NZS2 232 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CCDC59Q9P031 241 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF229Q9UJW7 825 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SSR3Q9UNL2 185 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RBMX2Q9Y388 322 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 HS3ST3B1Q9Y662 390 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 U3KQE9 123 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CACNA1CQ13936 2221 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 EP300Q09472 2414 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ANKUB1A6NFN9 424 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 FAM171A2A8MVW0 826 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 BET1O15155 118 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SULT1B1O43704 296 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SLC25A12O75746 678 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 STK17BO94768 372 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms