RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CCDC22O60826 627 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 UGT2B15P54855 530 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
HMGN3-202ENST00000344726 CAMK2DQ13557 499 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 MUC15Q8N387 334 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 PFN4Q8NHR9 129 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
HMGN3-202ENST00000344726 LRR1Q96L50 414 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 SLC38A2Q96QD8 506 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 CACNG6Q9BXT2 260 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 SLC19A3Q9BZV2 496 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 ALG2Q9H553 416 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 NANSQ9NR45 359 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 FAIMQ9NVQ4 179 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 RIMS3Q9UJD0 308 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
HMGN3-202ENST00000344726 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF99A8MXY4 864 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-202ENST00000344726 INAFM1C9JVW0 142 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 OR5F1O95221 314 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 IGLV1-44P01699 117 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 CELA3BP08861 270 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 CECR9P0C854 216 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 IFNGR1P15260 489 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 DRD4P21917 467 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 PCSK6P29122 969 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 FABP6P51161 128 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 SLC7A2P52569 658 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 GYS2P54840 703 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 BIDP55957 195 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 TAS2R41P59536 307 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 UBE2NP61088 152 aaKnown RBP12.55□□□□□ -0.4
HMGN3-202ENST00000344726 SELENOWP63302 87 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 LIPEQ05469 1076 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 ZP4Q12836 540 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 ARPINQ7Z6K5 226 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 DEPDC4Q8N2C3 294 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 TPD52L3Q96J77 140 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 C20orf141Q9NUB4 165 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF229Q9UJW7 825 aa12.55□□□□□ -0.4
HMGN3-202ENST00000344726 IFNA14P01570 189 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 IGKV3-15P01624 115 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 MT-ND1P03886 318 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 CALCRP30988 508 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 GSK3BP49841 420 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 NAAAQ02083 359 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 MELKQ14680 651 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 ETFDHQ16134 617 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF544Q6NX49 715 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 SLC35D2Q76EJ3 337 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 VTCN1Q7Z7D3 282 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 PRIMA1Q86XR5 153 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 FBXL14Q8N1E6 418 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 POLR2J2Q9GZM3 115 aaKnown RBP12.54□□□□□ -0.4
HMGN3-202ENST00000344726 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 POLR2J3Q9H1A7 115 aaKnown RBP12.54□□□□□ -0.4
HMGN3-202ENST00000344726 EFCAB1Q9HAE3 211 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 A4GNTQ9UNA3 340 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 CUBNO60494 3623 aa12.54□□□□□ -0.4
HMGN3-202ENST00000344726 IGHV4-30-2A0A087WSY4 118 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 A0A096LNT2 108 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF726A6NNF4 738 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 CXCR6O00574 342 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 RNF13O43567 381 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 SSX4O60224 188 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 PIP5K1CO60331 668 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 SNX3O60493 162 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 OR6A2O95222 327 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 UMPSP11172 480 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 CBR1P16152 277 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
HMGN3-202ENST00000344726 LSP1P33241 339 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
HMGN3-202ENST00000344726 NUDT2P50583 147 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 C3orf36Q3SXR2 165 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 HACD2Q6Y1H2 254 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 NANOGNBQ7Z5D8 188 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 MDP1Q86V88 176 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 OR6N1Q8NGY5 312 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 TMEM54Q969K7 222 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
HMGN3-202ENST00000344726 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 REG4Q9BYZ8 158 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 B3GNT2Q9NY97 397 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 ZNF224Q9NZL3 707 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 AP3M1Q9Y2T2 418 aa12.53□□□□□ -0.4
HMGN3-202ENST00000344726 JMJD1CQ15652 2540 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms