RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SAP25Q8TEE9 199 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 INTS12Q96CB8 462 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 FUNDC2Q9BWH2 189 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 SYT4Q9H2B2 425 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 B3GAT1Q9P2W7 334 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ENPP5Q9UJA9 477 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 MYOFQ9NZM1 2061 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 M0R129 80 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 SELEP16581 610 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ADARB1P78563 741 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 B3GNTL1Q67FW5 361 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 CPEB3Q8NE35 698 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ARSGQ96EG1 525 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 SLC25A44Q96H78 314 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 FKRPQ9H9S5 495 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 PCOLCE2Q9UKZ9 415 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 FOCADQ5VW36 1801 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 LOC285556D6RIA3 1793 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 B4DXG7 233 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 P2RX6O15547 441 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF44P15621 663 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ARSBP15848 533 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 AP2S1P53680 142 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 EMC4Q5J8M3 183 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 BORAQ6PGQ7 559 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 MRPL41Q8IXM3 137 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 SORCS2Q96PQ0 1159 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 METTL9Q9H1A3 318 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 HDGFL3Q9Y3E1 203 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 OR2AT4A6NND4 320 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 ALPLP05186 524 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 CDH24Q86UP0 819 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 Q8N402 240 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 NELFAQ9H3P2 528 aa14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 UBE2J1Q9Y385 318 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-201ENST00000344626 TRAV18A0A075B6X5 111 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 H7C417 338 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 SNAPC5O75971 98 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 STOMP27105 288 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 EMP3P54852 163 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF91Q05481 1191 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 AGERQ15109 404 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 WIPI1Q5MNZ9 446 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CLDN23Q96B33 292 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 EGLN1Q9GZT9 426 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF768Q9H5H4 540 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 PFDN2Q9UHV9 154 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 PARP14Q460N5 1801 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 SLC22A20A6NK97 555 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 LRRC30A6NM36 301 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 DAPP51397 102 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 TMPRSS3P57727 454 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ANKRD34AQ69YU3 496 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CSNK2A3Q8NEV1 391 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 NRTNQ99748 197 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CD300AQ9UGN4 299 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ASB4Q9Y574 426 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ANKUB1A6NFN9 424 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 PRSS3P35030 304 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 TRILQ7L0X0 811 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 FOXRED2Q8IWF2 684 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CCDC71LQ8N9Z2 235 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 TBC1D15Q8TC07 691 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CREB3L1Q96BA8 519 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 OXGR1Q96P68 337 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CRLF2Q9HC73 371 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 NUDT15Q9NV35 164 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 TMEM72A0PK05 275 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 KIR2DL3P43628 341 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 GABRA2P47869 451 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 FAPQ12884 760 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 IL17RDQ8NFM7 739 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 OR4F15Q8NGB8 312 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 C11orf40Q8WZ69 217 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 PHOX2BQ99453 314 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 PRR14Q9BWN1 585 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 GSKIPQ9P0R6 139 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 TBX19O60806 448 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 FBXO45P0C2W1 286 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ARR3P36575 388 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 CRMP1Q14194 572 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 NPSR1Q6W5P4 371 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 SLC22A18ASQ8N1D0 253 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 D2HGDHQ8N465 521 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF615Q8N8J6 731 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF610Q8N9Z0 462 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 B3GALT5Q9Y2C3 310 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 AK6Q9Y3D8 172 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 ATP23Q9Y6H3 246 aa14.98□□□□□ -0.01
SMARCA4-201ENST00000344626 DICER1Q9UPY3 1922 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SBK3P0C264 359 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 MEOX1P50221 254 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 DUSP7Q16829 419 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 AKIRIN2Q53H80 203 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF517Q6ZMY9 492 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SLC37A3Q8NCC5 494 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 V9GY05 133 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 GLCEO94923 617 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms