RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 OR13C7P0DN81 318 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 CDK5R2Q13319 367 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 PAFAH1B3Q15102 231 aaKnown RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 MISPQ8IVT2 679 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 TMEM19Q96HH6 336 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 FBXO8Q9NRD0 319 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 HEATR5AQ86XA9 2040 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 C17orf107Q6ZR85 190 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 MEPCEQ7L2J0 689 aaKnown RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 MTURNQ8N3F0 131 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 OR8J2Q8NGG1 315 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 TFAP2CQ92754 450 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
SMAD4-201ENST00000342988 KLRC4O43908 158 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ICMTO60725 284 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ADRA2CP18825 462 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 IDUAP35475 653 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 OR3A1P47881 315 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 FUT1P19526 365 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 LYPD4Q6UWN0 246 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 MN1Q10571 1320 aaPredicted RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 RNASET2O00584 256 aaKnown RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 LMO2P25791 158 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 DUSP19Q8WTR2 217 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 C1orf74Q96LT6 269 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 EXOGQ9Y2C4 368 aaKnown RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 RAD52P43351 418 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ELLP55199 621 aaPredicted RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 WDR4P57081 412 aaKnown RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 HRASLS5Q96KN8 279 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF816-ZNF321PA0A0X1KG74 233 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 SOX18P35713 384 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 FCRLBQ6BAA4 426 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 SOCS6O14544 535 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 GPRIN2O60269 458 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 LALBAP00709 142 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 HTR2CP28335 458 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 HOXA4Q00056 320 aaPredicted RBP16.41■□□□□ 0.22
SMAD4-201ENST00000342988 MANEAQ5SRI9 462 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 OPN5Q6U736 354 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 KIAA1958Q8N8K9 716 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 SIX2Q9NPC8 291 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 C5AR1P21730 350 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ABLIM2Q6H8Q1 611 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 TVP23CQ96ET8 276 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 ST6GALNAC4Q9H4F1 302 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 C1GALT1Q9NS00 363 aa16.41■□□□□ 0.22
SMAD4-201ENST00000342988 MAP2K6P52564 334 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 TPBGQ13641 420 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 PPP1R3AQ16821 1122 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 OR13D1Q8NGV5 346 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 P4HTMQ9NXG6 502 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 INTS6Q9UL03 887 aaKnown RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 MOGAT2Q3SYC2 334 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 AMMECR1LQ6DCA0 310 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 EMG1Q92979 244 aaKnown RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 ANKRD36A6QL64 1941 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 H0YIV9 168 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 CRYBA1P05813 215 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 GDF10P55107 478 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 TAS2R60P59551 318 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 SUCNR1Q9BXA5 334 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 CHST11Q9NPF2 352 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 DLL4Q9NR61 685 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 FAM166BA8MTA8 275 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 LRRC56Q8IYG6 542 aaPredicted RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 C20orf24Q9BUV8 137 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 RAB22AQ9UL26 194 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 VDAC3Q9Y277 283 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 KIR2DS1A0A191URI9 304 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 AQP7P3A6NL99 342 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF888P0CJ79 500 aaPredicted RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 KIR2DS4P43632 304 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 DCAF7P61962 342 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 KIR2DS1Q14954 304 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 COMMD1Q8N668 190 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 NECAP1Q8NC96 275 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 PURBQ96QR8 312 aaKnown RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 RFPL4AA6NLU0 287 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 RFPL4AL1F8VTS6 287 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 RPL17P18621 184 aaKnown RBP16.4■□□□□ 0.22
SMAD4-201ENST00000342988 KCNJ3P48549 501 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 EMP3P54852 163 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 CARD18P57730 90 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 TIMM29Q9BSF4 260 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 DCTN6O00399 190 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 FABP7O15540 132 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 TGFB1I1O43294 461 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 FABP9Q0Z7S8 132 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 GALNT2Q10471 571 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 TXNDC8Q6A555 127 aa16.4■□□□□ 0.22
SMAD4-201ENST00000342988 OR2AE1Q8NHA4 323 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms