RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 Q6ZSR9 355 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 RBMXL3Q8N7X1 1067 aaKnown RBP13.82□□□□□ -0.2
UBE3B-202ENST00000342494 SLAMF9Q96A28 289 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 GLTPQ9NZD2 209 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 RPH3ALQ9UNE2 315 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 PROCRQ9UNN8 238 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 SCN11AQ9UI33 1791 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 TPT1P13693 172 aaKnown RBP13.82□□□□□ -0.2
UBE3B-202ENST00000342494 GRB2P62993 217 aaKnown RBP13.82□□□□□ -0.2
UBE3B-202ENST00000342494 AKR1C1Q04828 323 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 Q499Y3 187 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 TMIGD2Q96BF3 282 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 MS4A6EQ96DS6 147 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 GIFP27352 417 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 PPP2CBP62714 309 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 PPP2CAP67775 309 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 Q6ZTK2 550 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 MICAL3Q7RTP6 2002 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 LILRA2Q8N149 483 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 ABHD4Q8TB40 342 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 ZFAND2BQ8WV99 257 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 PIGTQ969N2 578 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 OPRL1P41146 370 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 TGM4P49221 684 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 ZMAT1Q5H9K5 638 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 NXNL2Q5VZ03 156 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 BRICD5Q6PL45 260 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 SLC22A24Q8N4F4 322 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 MED18Q9BUE0 208 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 NDRG3Q9UGV2 375 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
UBE3B-202ENST00000342494 A0A1W2PS29 197 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 C4orf47A7E2U8 309 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 H7C1Q1 480 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 ADAM23O75077 832 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 GLB1P16278 677 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CPT2P23786 658 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 RNLSQ5VYX0 342 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 HES7Q9BYE0 225 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SEMA4CQ9C0C4 833 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 KCNJ16Q9NPI9 418 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 TNFRSF10AO00220 468 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SGCEO43556 437 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 UPK1BO75841 260 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 IL1AP01583 271 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CDK4P11802 303 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 DEFA4P12838 97 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CLDN12P56749 244 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 TRMT12Q53H54 448 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 PIWIL3Q7Z3Z3 882 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 DCXRQ7Z4W1 244 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF511Q8NB15 262 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 GHSRQ92847 366 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 ANKRD9Q96BM1 317 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 INTS12Q96CB8 462 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CHRNA9Q9UGM1 479 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 RCE1Q9Y256 329 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 PCDHGA5Q9Y5G8 931 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 MSTNO14793 375 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 NSA2O95478 260 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CXCL10P02778 98 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 T-ENOLP0DO92 83 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 ST6GAL1P15907 406 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SYT9Q86SS6 491 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CSF3RQ99062 836 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 EFSO43281 561 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CAPZBP47756 277 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 HACD4Q5VWC8 232 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 LPCAT3Q6P1A2 487 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CPEB2Q7Z5Q1 589 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 KDM8Q8N371 416 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 FAM71CQ8NEG0 241 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 FGF14Q92915 247 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 EMG1Q92979 244 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CRLF2Q9HC73 371 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 PIGLQ9Y2B2 252 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 VAMP5O95183 116 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SMN1Q16637 294 aaKnown RBP13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SLC22A25Q6T423 547 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 APOOLQ6UXV4 268 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 WFDC8Q8IUA0 241 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 LSMEM2Q8N112 164 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 FGGYQ96C11 551 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 PFDN5Q99471 154 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 CPNE5Q9HCH3 593 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 USP22Q9UPT9 525 aa13.81□□□□□ -0.2
UBE3B-202ENST00000342494 SELEP16581 610 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF93P35789 620 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms