RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MRPS2Q9Y399 296 aaKnown RBP11.4□□□□□ -0.58
SNRNP48-201ENST00000342415 GREB1Q4ZG55 1949 aa11.4□□□□□ -0.59
SNRNP48-201ENST00000342415 GABARAPH6UMI1 98 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF208O43345 1280 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 CD3DP04234 171 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 TBXA2RP21731 343 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC6A1P30531 599 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 OR7A5Q15622 319 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 Q5BKY6 102 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 MAMSTRQ6ZN01 415 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 KIAA0907Q7Z7F0 614 aaPredicted RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 OR11H7Q8NGC8 314 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 TOMM40LQ969M1 308 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 ASB16Q96NS5 453 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 MAP3K3Q99759 626 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 ISYNA1Q9NPH2 558 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 THAP10Q9P2Z0 257 aaPredicted RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 LSM2Q9Y333 95 aaKnown RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 MED12Q93074 2177 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 CD14P08571 375 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM88Q6PEY1 159 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 RCBTB1Q8NDN9 531 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 OR4C3Q8NH37 302 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 FAM3DQ96BQ1 224 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 LRRC3BQ96PB8 259 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 MYADMQ96S97 322 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 DHRS9Q9BPW9 319 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SELENOIQ9C0D9 397 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 OR10A5Q9H207 317 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 KIR3DX1Q9H7L2 352 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 EDARQ9UNE0 448 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 hCG_1807616A0A1W2PRN6 198 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 TRIM64BA6NI03 449 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 PYCARD-AS1I3L0S3 204 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 GREM1O60565 184 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 CTSVO60911 334 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 GLI4P10075 376 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 RBMXP38159 391 aaKnown RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SELENOPP49908 381 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SEC61A1P61619 476 aaKnown RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 KRBOX4Q5JUW0 171 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SPIN3Q5JUX0 258 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 TMUB2Q71RG4 321 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC37A2Q8TED4 501 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 HDAC8Q9BY41 377 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 PARP12Q9H0J9 701 aaKnown RBP11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 PPP1R3EQ9H7J1 279 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 UBQLN4Q9NRR5 601 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 DUSP22Q9NRW4 184 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 NCOR1O75376 2440 aa11.39□□□□□ -0.59
SNRNP48-201ENST00000342415 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM235A6NFC5 223 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 A6NJ64 397 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 IFNA21P01568 189 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 EN2P19622 333 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ACHEP22303 614 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 TLE3Q04726 772 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 GLO1Q04760 184 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 NFATC4Q14934 902 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 AANATQ16613 207 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC6A19Q695T7 634 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 LILRA6Q6PI73 481 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SSX6Q7RTT6 188 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 PHB2Q99623 299 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 RHBDD3Q9Y3P4 386 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SDK2Q58EX2 2172 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SERTM1A2A2V5 107 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 P2RX6O15547 441 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF264O43296 627 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SEMA7AO75326 666 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 CRTAPO75718 401 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ZFPL1O95159 310 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 PPP3CBP16298 524 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 CLRN1P58418 232 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 POU3F1Q03052 451 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 RASGEF1BQ0VAM2 473 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 TNK1Q13470 666 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 CORO6Q6QEF8 472 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 DUSP18Q8NEJ0 188 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 LINC00615Q96LM1 132 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 C19orf43Q9BQ61 176 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 RABL2BQ9UNT1 228 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 F5H5K5 113 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 TLX3O43711 291 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 PNMTP11086 282 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ST6GAL1P15907 406 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 FAM69BQ5VUD6 431 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 WBP2NLQ6ICG8 309 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 C3orf33Q6P1S2 294 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 Q6ZTK2 550 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 WDR89Q96FK6 387 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SENP5Q96HI0 755 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 KCNK15Q9H427 330 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 HHLA2Q9UM44 414 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 NYNRINQ9P2P1 1898 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms