RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 EDN1P05305 212 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR10J4P0C629 311 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ELNP15502 786 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF28P17035 718 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 S100A11P31949 105 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 EIF3IQ13347 325 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 C1orf61Q13536 156 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CLECL1Q8IZS7 167 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PLPPR2Q96GM1 343 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ABHD14BQ96IU4 210 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NUDT4Q9NZJ9 180 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 A0A0A6YYC8 382 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TMEM189-UBE2V1I3L0A0 370 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 I3L1I5 382 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MMP20O60882 483 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LSM11P83369 360 aaKnown RBP eCLIP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MGAT3Q09327 533 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CAPSQ13938 189 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ATRAIDQ6UW56 229 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR1J1Q8NGS3 322 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 P2RY11Q96G91 374 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 CLCC1Q96S66 551 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 BDKRB2P30411 391 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 UQCRFS1P47985 274 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 RING1Q06587 406 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SSPNQ14714 243 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MAVSQ7Z434 540 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 FAM185AQ8N0U4 392 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PARP16Q8N5Y8 322 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF383Q8NA42 475 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZMYND19Q96E35 227 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GMPPAQ96IJ6 420 aaPredicted RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 FCRL5Q96RD9 977 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TAAR9Q96RI9 348 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SRSF8Q9BRL6 282 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ARHGAP9Q9BRR9 750 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SNAI2O43623 268 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SRYQ05066 204 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GPR17Q13304 367 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 LIPNQ5VXI9 398 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR4F15Q8NGB8 312 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR4M1Q8NGD0 313 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TMUB1Q9BVT8 246 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZCCHC3Q9NUD5 404 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 NPTNQ9Y639 398 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ARHGAP33O14559 1287 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 KCNJ3P48549 501 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TAS2R31P59538 309 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ADPRMQ3LIE5 342 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PINX1Q96BK5 328 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 DUSP16Q9BY84 665 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MARCH5Q9NX47 278 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 SOCS5O75159 536 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 GPR137CQ8N3F9 429 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 PTX4Q96A99 478 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ACPTQ9BZG2 426 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 MFSD1Q9H3U5 465 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 EPHA1P21709 976 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ELOA3BQ3SY89 546 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 THEM4Q5T1C6 240 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 RBMS3Q6XE24 437 aaKnown RBP3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF813Q6ZN06 617 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ACBD7Q8N6N7 88 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 ELOA3Q8NG57 546 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OR5L2Q8NGL0 311 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 OSMRQ99650 979 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 RXFP3Q9NSD7 469 aa3.28□□□□□ -1.88
SYNE1-201ENST00000341594 TOX3O15405 576 aaPredicted RBP3.28□□□□□ -1.89
SYNE1-201ENST00000341594 OXTRP30559 389 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 MANFP55145 182 aaKnown RBP3.28□□□□□ -1.89
SYNE1-201ENST00000341594 MTCP1P56278 107 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 POU2AF1Q16633 256 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 LAS2Q8IYD9 372 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 GPHA2Q96T91 129 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 SEMA3CQ99985 751 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 WNT3AP56704 352 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 LMAN2Q12907 356 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 ISXQ2M1V0 245 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF468Q5VIY5 522 aaPredicted RBP3.28□□□□□ -1.89
SYNE1-201ENST00000341594 KREMEN2Q8NCW0 462 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 NDUFB11Q9NX14 153 aa3.28□□□□□ -1.89
SYNE1-201ENST00000341594 A0A1W2PPQ1 181 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 F5H5T6 163 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KLK8O60259 260 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ADH4P08319 380 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GPX3P22352 226 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TSFMP43897 325 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RPS24P62847 133 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PRDX4Q13162 271 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ASCL2Q99929 193 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 OR52A5Q9H2C5 316 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 HCSTQ9UBK5 93 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ARL2P36404 184 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 C11orf42Q8N5U0 333 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KLHDC1Q8N7A1 406 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 HAPLN2Q9GZV7 340 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ERRFI1Q9UJM3 462 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 C2CD4BA6NLJ0 364 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms