RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LINC01565O15544 149 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SMIM10L1P0DMW3 83 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 GPR143P51810 404 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SYS1Q8N2H4 156 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 DUSP19Q8WTR2 217 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 TTC9Q92623 222 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SMIM10Q96HG1 83 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SARGQ9BW04 601 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SORDQ00796 357 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SCGB2B2Q4G0G5 96 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 NPSR1Q6W5P4 371 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SLC35F3Q8IY50 421 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SLC2A12Q8TD20 617 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SLC37A2Q8TED4 501 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 OR8D2Q9GZM6 311 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 ATG5Q9H1Y0 275 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 NKX2-2O95096 273 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 C7orf50Q9BRJ6 194 aaKnown RBP13.12□□□□□ -0.31
CPSF7-201ENST00000340437 TPSD1Q9BZJ3 242 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 NUP50Q9UKX7 468 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF337Q9Y3M9 751 aa13.12□□□□□ -0.31
CPSF7-201ENST00000340437 DOCK8Q8NF50 2099 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 A0A087WV62 115 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 TGFBR3LH3BV60 316 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 TSPAN9O75954 239 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 OR6A2O95222 327 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 EGFP01133 1207 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 TACSTD2P09758 323 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 DPY19L2P2Q6ZN68 376 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 MRM2Q9UI43 246 aaKnown RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 SERINC4A6NH21 518 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 G3V3Q6 166 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 M0QYG6 137 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 ACOT7O00154 380 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 CTNSO60931 367 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 GLCEO94923 617 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 AK1P00568 194 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 VSIG10L2P0DP72 767 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 RRASP10301 218 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 BIKQ13323 160 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 TUSC1Q2TAM9 212 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 Q499Y3 187 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 B3GNTL1Q67FW5 361 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 KDM8Q8N371 416 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 TEX19Q8NA77 164 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 OR4C16Q8NGL9 310 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 BAHD1Q8TBE0 780 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 HGDQ93099 445 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 LYRM4Q9HD34 91 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 SOHLH2Q9NX45 425 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 APOC3P02656 99 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 SLC35E2P0CK97 266 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 NKPD1Q17RQ9 610 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 FAM74A1Q5RGS3 127 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 DCAF12L2Q5VW00 463 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 LIN54Q6MZP7 749 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
CPSF7-201ENST00000340437 BCORP1Q8N888 145 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 ADOQ96SZ5 270 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 COMMD4Q9H0A8 199 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 SERTAD3Q9UJW9 196 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 SESN1Q9Y6P5 492 aa13.11□□□□□ -0.31
CPSF7-201ENST00000340437 CD226Q15762 336 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 BAIAP2L2Q6UXY1 529 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 C17orf107Q6ZR85 190 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 MED25Q71SY5 747 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 AMELYQ99218 206 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 MNTQ99583 582 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 PIPOXQ9P0Z9 390 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 FBXL21Q9UKT6 434 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms