RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 POU5F2Q8N7G0 328 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 HIST1H2ACQ93077 130 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 HS6ST2Q96MM7 605 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 KCNS3Q9BQ31 491 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 CRLF2Q9HC73 371 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 CBLN4Q9NTU7 201 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 C2CD3Q4AC94 2353 aa11.65□□□□□ -0.54
SIRPB3P-201ENST00000340424 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.55
SIRPB3P-201ENST00000340424 E7EQL1 145 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 HPRP00739 348 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 THY1P04216 161 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 ASAH2BP0C7U1 165 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 HLA-DOBP13765 273 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 FABP6P51161 128 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 SELENOWP63302 87 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 ARF1P84077 181 aaKnown RBP11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 LGALS3BPQ08380 585 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 DEF8Q6ZN54 512 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 MUC15Q8N387 334 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 IL17RDQ8NFM7 739 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 PRSS27Q9BQR3 290 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 C1QTNF6Q9BXI9 259 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 RIMS3Q9UJD0 308 aa11.64□□□□□ -0.55
SIRPB3P-201ENST00000340424 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 H7C1Q1 480 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 RNF13O43567 381 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 CH25HO95992 272 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 CD8AP01732 235 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 CRYAAP02489 173 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 MT-ND1P03886 318 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 PRDX6P30041 224 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 APOBEC3AP31941 199 aaPredicted RBP11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 ARR3P36575 388 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 LIPEQ05469 1076 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 CHRNB3Q05901 458 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 ST3GAL3Q11203 375 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 CEACAM16Q2WEN9 425 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 C8orf82Q6P1X6 216 aaPredicted RBP11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 NHLRC1Q6VVB1 395 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 NANOGNBQ7Z5D8 188 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 TSPYL5Q86VY4 417 aaPredicted RBP11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 OR6N1Q8NGY5 312 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 ULBP2Q9BZM5 246 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 DENND2DQ9H6A0 471 aaPredicted RBP11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 MED29Q9NX70 200 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 USP22Q9UPT9 525 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 ATP23Q9Y6H3 246 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 PLCE1Q9P212 2302 aa11.63□□□□□ -0.55
SIRPB3P-201ENST00000340424 NIPBLQ6KC79 2804 aaeCLIP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 A0A096LPE4 126 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 A0A1W2PPZ6 126 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 VGLL3A8MV65 326 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 CENPBD1B2RD01 187 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 M0R3G1 203 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 KPNA4O00629 521 aaPredicted RBP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 GSTA4O15217 222 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 DCTN3O75935 186 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 PDE5AO76074 875 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 UMPSP11172 480 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 CBR1P16152 277 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 PTNP21246 168 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 CDKN1AP38936 164 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 CSNK1A1P48729 337 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 NUDT2P50583 147 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC7A2P52569 658 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 CLEC12BQ2HXU8 276 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 B3GLCTQ6Y288 498 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 SLC35D2Q76EJ3 337 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 TMEM239Q8WW34 195 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 LIPHQ8WWY8 451 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 GEMIN6Q8WXD5 167 aaKnown RBP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 PRRC1Q96M27 445 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 EMC6Q9BV81 110 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 MYLK2Q9H1R3 596 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 LRMDAQ9H2I8 198 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 MEPEQ9NQ76 525 aaPredicted RBP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 STX18Q9P2W9 335 aaKnown RBP11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 POFUT2Q9Y2G5 429 aa11.62□□□□□ -0.55
SIRPB3P-201ENST00000340424 MED31Q9Y3C7 131 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms