RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 SEC14L2O76054 403 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 MSMBP08118 114 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 BMP2P12643 396 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 TCN1P20061 433 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 COL8A2P25067 703 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 MYBPC1Q00872 1141 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 CAMK2DQ13557 499 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 MOGQ16653 247 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 GLIPR1L2Q4G1C9 344 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 REEP3Q6NUK4 255 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 PIWIL3Q7Z3Z3 882 aaKnown RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 PXKQ7Z7A4 578 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 MAL2Q969L2 176 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 VPS33AQ96AX1 596 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 ZMYND19Q96E35 227 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 FOXB1Q99853 325 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 SYT3Q9BQG1 590 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 ZNF385DQ9H6B1 395 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 MRPL39Q9NYK5 338 aaKnown RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 SEC14L4Q9UDX3 406 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 TESQ9UGI8 421 aaKnown RBP12.23□□□□□ -0.45
COMMD4-202ENST00000338995 SLC7A8Q9UHI5 535 aa12.23□□□□□ -0.45
COMMD4-202ENST00000338995 TRAV20A0A0B4J274 112 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 TRIM77I1YAP6 450 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 SNNO75324 88 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 FARS2O95363 451 aaKnown RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 PTHP01270 115 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 NUDT7P0C024 238 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 SLC6A2P23975 617 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 CFPP27918 469 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 ALDH3B1P43353 468 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 GIPRP48546 466 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 AQP5P55064 265 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 STX1BP61266 288 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 ACTG1P63261 375 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 TEKQ02763 1124 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 PUDPQ08623 228 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 NKPD1Q17RQ9 610 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 GCNT6Q5T4J0 391 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 FAHD2BQ6P2I3 314 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 DHRS4L2Q6PKH6 230 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 RANBP3LQ86VV4 465 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 CLDND2Q8NHS1 167 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 FAHD2AQ96GK7 314 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 MAELQ96JY0 434 aaKnown RBP12.22□□□□□ -0.45
COMMD4-202ENST00000338995 LRRC37BQ96QE4 947 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 LRMDAQ9H2I8 198 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 NARFLQ9H6Q4 476 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 SLC52A3Q9NQ40 469 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 TREM2Q9NZC2 230 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 CORO2BQ9UQ03 480 aa12.22□□□□□ -0.45
COMMD4-202ENST00000338995 EVPLLA8MZ36 301 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 VENTXO95231 258 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 HPXP02790 462 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 MT-ND5P03915 603 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 SERPINA5P05154 406 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-202ENST00000338995 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 HLA-DOBP13765 273 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 B4GALT1P15291 398 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 SEC24CP53992 1094 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 RGS8P57771 180 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-202ENST00000338995 CDK6Q00534 326 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 OR1Q1Q15612 314 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 PCGF3Q3KNV8 242 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 TNFAIP8L3Q5GJ75 292 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 PHYHD1Q5SRE7 291 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-202ENST00000338995 ACSM5Q6NUN0 579 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 TREML1Q86YW5 311 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 SGMS2Q8NHU3 365 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 NFKBIDQ8NI38 313 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 C11orf40Q8WZ69 217 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 TMEM43Q9BTV4 400 aa12.21□□□□□ -0.45
COMMD4-202ENST00000338995 PLA2G12AQ9BZM1 189 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms