RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 USB1Q9BQ65 265 aaKnown RBP13.59□□□□□ -0.23
SEC13-201ENST00000337354 EMC6Q9BV81 110 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 SLCO5A1Q9H2Y9 848 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 OR52D1Q9H346 318 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 NRIP3Q9NQ35 241 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 MALT1Q9UDY8 824 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 ZNF346Q9UL40 294 aaKnown RBP13.59□□□□□ -0.23
SEC13-201ENST00000337354 USP9YO00507 2555 aaPredicted RBP13.59□□□□□ -0.23
SEC13-201ENST00000337354 PCNX1Q96RV3 2341 aa13.59□□□□□ -0.23
SEC13-201ENST00000337354 IMPA2O14732 288 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 KRT33AO76009 404 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 CLDN1O95832 211 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 ZNF26P17031 533 aaPredicted RBP13.58□□□□□ -0.23
SEC13-201ENST00000337354 PRKACGP22612 351 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 CD79BP40259 229 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 RPS6KA3P51812 740 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 BIDP55957 195 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.23
SEC13-201ENST00000337354 ITGADQ13349 1161 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 FAHD1Q6P587 224 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 ZNF620Q6ZNG0 422 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 C20orf196Q8IYI0 205 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 TMEM123Q8N131 208 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 PQLC1Q8N2U9 271 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 ARIH2OSQ8N7S6 290 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 FANK1Q8TC84 345 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 FNDC8Q8TC99 324 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 ZNF566Q969W8 418 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 POLDIP3Q9BY77 421 aaKnown RBP13.58□□□□□ -0.23
SEC13-201ENST00000337354 SLC7A10Q9NS82 523 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 GRHPRQ9UBQ7 328 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 PRSS50Q9UI38 385 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 GPR52Q9Y2T5 361 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 CDH10Q9Y6N8 788 aa13.58□□□□□ -0.23
SEC13-201ENST00000337354 CACNA1CQ13936 2221 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 A6NIZ1 184 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 RPL36A-HNRNPH2H7BZ11 118 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 ARPC3O15145 178 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 IDH3BO43837 385 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 AHCYL1O43865 530 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 IGHG1P01857 330 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 NR2C1P13056 603 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 ACADSP16219 412 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 PSMB1P20618 241 aaKnown RBP13.58□□□□□ -0.24
SEC13-201ENST00000337354 EDNRAP25101 427 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 FXYD6P3P58550 94 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 RAP1BP61224 184 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 RAP1AP62834 184 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 SORDQ00796 357 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 HIST2H2BCQ6DN03 193 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 HS3ST5Q8IZT8 346 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 GPR137CQ8N3F9 429 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 OR52L1Q8NGH7 329 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 OR6N1Q8NGY5 312 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 ASB10Q8WXI3 467 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 KATNB1Q9BVA0 655 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 MRPL13Q9BYD1 178 aaKnown RBP13.58□□□□□ -0.24
SEC13-201ENST00000337354 ENKD1Q9H0I2 346 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 GABARAPL1Q9H0R8 117 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 OR10A4Q9H209 315 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 B3GAT2Q9NPZ5 323 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 OAZ3Q9UMX2 235 aa13.58□□□□□ -0.24
SEC13-201ENST00000337354 MAGED1Q9Y5V3 778 aaPredicted RBP13.58□□□□□ -0.24
SEC13-201ENST00000337354 PRSS44E7EML9 344 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 C16orf97H3BN30 126 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 UPK3AO75631 287 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 BAG2O95816 211 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 TXNDC12O95881 172 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 IGHV3-9P01782 118 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 OSMP13725 252 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 MPGP29372 298 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 SDHAP31040 664 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 CSNK1A1P48729 337 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 ERVK-25P63136 954 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 ELF3P78545 371 aaPredicted RBP13.57□□□□□ -0.24
SEC13-201ENST00000337354 TGFBR3Q03167 851 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 FAM27E3Q08E93 113 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 FAPQ12884 760 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 CAMK2DQ13557 499 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 MELKQ14680 651 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 STK11Q15831 433 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 SFRP5Q5T4F7 317 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 THSD4Q6ZMP0 1018 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.57□□□□□ -0.24
SEC13-201ENST00000337354 FAM122BQ7Z309 247 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 IGFN1Q86VF2 1251 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 ICA1LQ8NDH6 482 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 TMEM54Q969K7 222 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 SAMD8Q96LT4 415 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 IFT27Q9BW83 186 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 KIF17Q9P2E2 1029 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 ENOPH1Q9UHY7 261 aa13.57□□□□□ -0.24
SEC13-201ENST00000337354 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms