RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TRAPPC6BQ86SZ2 158 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 TMEM25Q86YD3 366 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF561Q8N587 486 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 NUBPLQ8TB37 319 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 ATOH1Q92858 354 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 AMDHD1Q96NU7 426 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 ENKD1Q9H0I2 346 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 MRPL22Q9NWU5 206 aaKnown RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 KCMF1Q9P0J7 381 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 LRFN1Q9P244 771 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 CGGBP1Q9UFW8 167 aaPredicted RBP12.22□□□□□ -0.45
COL2A1-201ENST00000337299 A4GNTQ9UNA3 340 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
COL2A1-201ENST00000337299 LDB3O75112 727 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 CTSEP14091 401 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 GNMTQ14749 295 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 AWAT2Q6E213 333 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 NUP54Q7Z3B4 507 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 CRLF2Q9HC73 371 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.21□□□□□ -0.45
COL2A1-201ENST00000337299 GVINP1Q7Z2Y8 2422 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 SEC16AO15027 2179 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 OR52A4PA6NMU1 304 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 K7EPK0 472 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 OR2T1O43869 369 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 NAGAP17050 411 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 CHATP28329 748 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 KCNAB1Q14722 419 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 GUCA2BQ16661 112 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 MPEG1Q2M385 716 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF805Q5CZA5 627 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 LCTLQ6UWM7 567 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 FAM71E2Q8N5Q1 922 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
COL2A1-201ENST00000337299 UNKLQ9H9P5 680 aaKnown RBP12.21□□□□□ -0.45
COL2A1-201ENST00000337299 C7orf66A4D0T2 115 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 LEFTY2O00292 366 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 FOXE1O00358 373 aaPredicted RBP12.21□□□□□ -0.46
COL2A1-201ENST00000337299 H2BFMP0C1H6 154 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 OR52W1Q6IF63 320 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 METTL27Q8N6F8 245 aaPredicted RBP12.21□□□□□ -0.46
COL2A1-201ENST00000337299 BADQ92934 168 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 PDFQ9HBH1 243 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 NCDNQ9UBB6 729 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 ATG4BQ9Y4P1 393 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 NRAPQ86VF7 1730 aa12.21□□□□□ -0.46
COL2A1-201ENST00000337299 HSPA12AO43301 675 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SEC14L5O43304 696 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 GLI4P10075 376 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 OMGP23515 440 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 DECR1Q16698 335 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 BHLHA9Q7RTU4 235 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF550Q7Z398 422 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 MRPL41Q8IXM3 137 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 FAM3DQ96BQ1 224 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 RHOFQ9HBH0 211 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 A0A1W2PS29 197 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TMEM235A6NFC5 223 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 PPM1DO15297 605 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 P2RX6O15547 441 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 CTNSO60931 367 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 NFATC1O95644 943 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 CSTBP04080 98 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 NFYBP25208 207 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 GPR143P51810 404 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 GPNMBQ14956 572 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 LINC01465Q8N7H1 131 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 FRZBQ92765 325 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF587Q96SQ5 575 aaPredicted RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ALG12Q9BV10 488 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 PTGFRP43088 359 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 LBX1P52954 281 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 Q6ZRG5 221 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 RTN4RL1Q86UN2 441 aaPredicted RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TMEFF1Q8IYR6 380 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SLC30A7Q8NEW0 376 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 FNDC9Q8TBE3 224 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 MS4A4EQ96PG1 132 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TBL1XR1Q9BZK7 514 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 CCDC86Q9H6F5 360 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ELOVL3Q9HB03 270 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TESQ9UGI8 421 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 FBXL4Q9UKA2 621 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms