RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.12■□□□□ 0.65
TPM1-204ENST00000334895 CRMP1Q14194 572 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 MAD2L1BPQ15013 274 aaPredicted RBP19.12■□□□□ 0.65
TPM1-204ENST00000334895 PDK3Q15120 406 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 LAIR2Q6ISS4 152 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 THAP5Q7Z6K1 395 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 MARVELD2Q8N4S9 558 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 SLC37A3Q8NCC5 494 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 SETD9Q8NE22 299 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 SDR9C7Q8NEX9 313 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 OR8J1Q8NGP2 316 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 TEX12Q9BXU0 123 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 PRRG4Q9BZD6 226 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 FAM215AQ9Y5M1 114 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 HSPE1-MOB4S4R3N1 261 aa19.12■□□□□ 0.65
TPM1-204ENST00000334895 TLX2O43763 284 aaPredicted RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 CLDN17P56750 224 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 SNRPGP62308 76 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 RPTNQ6XPR3 784 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 BCDIN3DQ7Z5W3 292 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 CYB561A3Q8NBI2 242 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 NPEPL1Q8NDH3 523 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 CNIH3Q8TBE1 160 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 TMEM163Q8TC26 289 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 TRUB1Q8WWH5 349 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 HDAC2Q92769 488 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 NMNAT3Q96T66 252 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 PRRG3Q9BZD7 231 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 RNF122Q9H9V4 155 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 HINT3Q9NQE9 182 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 KLHL9Q9P2J3 617 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 CLEC4AQ9UMR7 237 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 NBASA2RRP1 2371 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 SLC35F4A4IF30 521 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 RIIAD1A6NNX1 92 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 H7C1C5 153 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 SLC19A2O60779 497 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 WDR1O75083 606 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 WBP4O75554 376 aaKnown RBP19.11■□□□□ 0.65
TPM1-204ENST00000334895 LCN6P62502 163 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 NSUN5P2Q63ZY6 315 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 SEM1Q6ZVN7 128 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 HCAR1Q9BXC0 346 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 BCO1Q9HAY6 547 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 KLHL21Q9UJP4 597 aa19.11■□□□□ 0.65
TPM1-204ENST00000334895 DOCK7Q96N67 2140 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 OR6C68A6NDL8 312 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 CD8B2A6NJW9 211 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 FAM183AA6NL82 134 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 ARHGEF9O43307 516 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 ZNF432O94892 652 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 IFNGP01579 166 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 FCGR2AP12318 317 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 GABRA1P14867 456 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 ITGADQ13349 1161 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 MED21Q13503 144 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 RNPS1Q15287 305 aaKnown RBP19.1■□□□□ 0.65
TPM1-204ENST00000334895 LEG1Q6P5S2 330 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 TUSC5Q8IXB3 177 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 RPRMLQ8N4K4 120 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 FAM26EQ8N5C1 309 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 C9orf106Q8NAJ2 232 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 OR6X1Q8NH79 312 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 WNT2BQ93097 391 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 PLEKHA8Q96JA3 519 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 MED20Q9H944 212 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 CALHM2Q9HA72 323 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 LRCH1Q9Y2L9 728 aa19.1■□□□□ 0.65
TPM1-204ENST00000334895 ARHGAP21Q5T5U3 1957 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 RP1L1Q8IWN7 2480 aaPredicted RBP19.09■□□□□ 0.65
TPM1-204ENST00000334895 FIGNL2A6NMB9 653 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 TRMUO75648 421 aaKnown RBP19.09■□□□□ 0.65
TPM1-204ENST00000334895 ZNF3P17036 446 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 ACVR2AP27037 513 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 CDK5R2Q13319 367 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 C1orf185Q5T7R7 199 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 FAM205BPQ63HN1 556 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 PLBD1Q6P4A8 553 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 ADCK1Q86TW2 530 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 DOLPP1Q86YN1 238 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 CPOQ8IVL8 374 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 ST6GALNAC3Q8NDV1 305 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 BBS1Q8NFJ9 593 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 PTP4A1Q93096 173 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 OR2M2Q96R28 347 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 KCNK17Q96T54 332 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 MRPL13Q9BYD1 178 aaKnown RBP19.09■□□□□ 0.65
TPM1-204ENST00000334895 FN3KQ9H479 309 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 ZNF462Q96JM2 2506 aa19.09■□□□□ 0.65
TPM1-204ENST00000334895 PRSS37A4D1T9 235 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 A6NIZ1 184 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 ZNF724A8MTY0 619 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 PGA4P0DJD7 388 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 PGA3P0DJD8 388 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 PTGER4P35408 488 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 SELENOPP49908 381 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 RAP1BP61224 184 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 RAP1AP62834 184 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 CAMK2DQ13557 499 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 SF3B4Q15427 424 aaKnown RBP eCLIP19.08■□□□□ 0.651e-9■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms