RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SELENOPP49908 381 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 BIDP55957 195 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 NPRL3Q12980 569 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 PTGES3Q15185 160 aaKnown RBP15.5■□□□□ 0.07
CHGA-202ENST00000334654 TAF11Q15544 211 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 HSPB2Q16082 182 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 TMEM201Q5SNT2 666 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 TMEM236Q5W0B7 351 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.5■□□□□ 0.07
CHGA-202ENST00000334654 CCDC71Q8IV32 467 aaPredicted RBP15.5■□□□□ 0.07
CHGA-202ENST00000334654 TMEM123Q8N131 208 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 LNX2Q8N448 690 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 IQCF1Q8N6M8 205 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 OR6X1Q8NH79 312 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 OR2M2Q96R28 347 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 MBOAT4Q96T53 435 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 IFT27Q9BW83 186 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 POLDIP3Q9BY77 421 aaKnown RBP15.5■□□□□ 0.07
CHGA-202ENST00000334654 MRPL13Q9BYD1 178 aaKnown RBP15.5■□□□□ 0.07
CHGA-202ENST00000334654 PLSCR4Q9NRQ2 329 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 TBC1D23Q9NUY8 699 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 RNF6Q9Y252 685 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 RCE1Q9Y256 329 aa15.5■□□□□ 0.07
CHGA-202ENST00000334654 SNAP29O95721 258 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 IL18BPO95998 194 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 POU1F1P28069 291 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 PTDSS1P48651 473 aaKnown RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 TOP3AQ13472 1001 aaPredicted RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 GINS1Q14691 196 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 ZIK1Q3SY52 487 aaPredicted RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 AAED1Q7RTV5 226 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 ARIH2OSQ8N7S6 290 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 CNEP1R1Q8N9A8 125 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 OR52L1Q8NGH7 329 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 OR6K3Q8NGY3 331 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 RASD2Q96D21 266 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 ERMAPQ96PL5 475 aaPredicted RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 SFXN3Q9BWM7 321 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 TOR3AQ9H497 397 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 SLC25A19Q9HC21 320 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 C8orf4Q9NR00 106 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 ZNF629Q9UEG4 869 aaPredicted RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 ERRFI1Q9UJM3 462 aaPredicted RBP15.49■□□□□ 0.07
CHGA-202ENST00000334654 EMC9Q9Y3B6 208 aa15.49■□□□□ 0.07
CHGA-202ENST00000334654 ZAR1LA6NP61 321 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 IMPA2O14732 288 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 IDH3BO43837 385 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 MRPL33O75394 65 aaKnown RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 PLA2G2AP14555 144 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 SDHAP31040 664 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 VHLP40337 213 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 OR3A2P47893 321 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 DAP3P51398 398 aaKnown RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 RAD23AP54725 363 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 LGALS3BPQ08380 585 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 PGGHGQ32M88 737 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 MESTQ5EB52 335 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 GPR139Q6DWJ6 353 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 NIPAL3Q6P499 406 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 OR2T33Q8NG76 320 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 TEX47Q8TBZ9 253 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 HDAC2Q92769 488 aaKnown RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 SLC25A44Q96H78 314 aaPredicted RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 ADAD1Q96M93 576 aaKnown RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 KCNK17Q96T54 332 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 DDOQ99489 341 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 GRIP2Q9C0E4 1043 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 C12orf49Q9H741 205 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 PARPBPQ9NWS1 579 aa15.48■□□□□ 0.07
CHGA-202ENST00000334654 FOXD3Q9UJU5 478 aaPredicted RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 SPTBN1Q01082 2364 aaKnown RBP15.48■□□□□ 0.07
CHGA-202ENST00000334654 TEX13CA0A0J9YWL9 993 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 TRMUO75648 421 aaKnown RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 PGA4P0DJD7 388 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 PGA3P0DJD8 388 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 ACADSP16219 412 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 HIST1H1CP16403 213 aaKnown RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 ACVR1BP36896 505 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 CDKN2AP42771 156 aaKnown RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 RPS6KA3P51812 740 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 CAMK2DQ13557 499 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 CDSNQ15517 529 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 HIST3H3Q16695 136 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 PHYHD1Q5SRE7 291 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 TSPO2Q5TGU0 170 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 SLC27A4Q6P1M0 643 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 CASP12Q6UXS9 341 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 TFAP2EQ6VUC0 442 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 PTCHD4Q6ZW05 846 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 RELL2Q8NC24 303 aaPredicted RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 NMD3Q96D46 503 aaKnown RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 ZNF570Q96NI8 536 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 NDEL1Q9GZM8 345 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 RIBC2Q9H4K1 309 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 SMPD3Q9NY59 655 aaPredicted RBP15.47■□□□□ 0.07
CHGA-202ENST00000334654 GRHPRQ9UBQ7 328 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 BAIAP2Q9UQB8 552 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 SLC5A6Q9Y289 635 aa15.47■□□□□ 0.07
CHGA-202ENST00000334654 UPK3AO75631 287 aa15.46■□□□□ 0.07
CHGA-202ENST00000334654 SLC2A10O95528 541 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms