RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 COPS4Q9BT78 406 aa20.85■□□□□ 0.93
TSEN54-201ENST00000333213 MMP27Q9H306 513 aa20.85■□□□□ 0.93
TSEN54-201ENST00000333213 B4GALT7Q9UBV7 327 aa20.85■□□□□ 0.93
TSEN54-201ENST00000333213 ZNF346Q9UL40 294 aaKnown RBP20.85■□□□□ 0.93
TSEN54-201ENST00000333213 ZZEF1O43149 2961 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 RNF13O43567 381 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 SERPINI2O75830 405 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 SDHAP31040 664 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 CDKN2AP42771 156 aaKnown RBP20.84■□□□□ 0.93
TSEN54-201ENST00000333213 CLDN15P56746 228 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 PLGLB1Q02325 96 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.84■□□□□ 0.93
TSEN54-201ENST00000333213 NPEPL1Q8NDH3 523 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 MYDGFQ969H8 173 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 CHST11Q9NPF2 352 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 B3GAT1Q9P2W7 334 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 TRAPPC4Q9Y296 219 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 SLC6A5Q9Y345 797 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 ALPK2Q86TB3 2170 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 IGF2RP11717 2491 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 RIIAD1A6NNX1 92 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 K7EM74 188 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 K7ENP7 123 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 TAF4O00268 1085 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 RAMP1O60894 148 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 TXNDC12O95881 172 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 STSP08842 583 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 CD36P16671 472 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 OR2B6P58173 313 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 PMP22Q01453 160 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 PUDPQ08623 228 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 ZP4Q12836 540 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 MESTQ5EB52 335 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 INO80CQ6PI98 192 aaPredicted RBP20.84■□□□□ 0.93
TSEN54-201ENST00000333213 B3GLCTQ6Y288 498 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 GHDCQ8N2G8 530 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 LSM14AQ8ND56 463 aaKnown RBP20.84■□□□□ 0.93
TSEN54-201ENST00000333213 OTULINQ96BN8 352 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 FAM122AQ96E09 287 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 INIPQ9NRY2 104 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 B3GALT5Q9Y2C3 310 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 RAXQ9Y2V3 346 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 UGT2A1Q9Y4X1 527 aa20.84■□□□□ 0.93
TSEN54-201ENST00000333213 NCOR2Q9Y618 2525 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 OR6C68A6NDL8 312 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 SULT2B1O00204 365 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 TNFSF11O14788 317 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 IDH3BO43837 385 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 PMS2P2O95744 297 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 ZNF3P17036 446 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 GTF2E2P29084 291 aaKnown RBP20.83■□□□□ 0.93
TSEN54-201ENST00000333213 SUCLG1P53597 346 aaKnown RBP20.83■□□□□ 0.93
TSEN54-201ENST00000333213 PPIAP62937 165 aaKnown RBP20.83■□□□□ 0.93
TSEN54-201ENST00000333213 ST3GAL4Q11206 333 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 ACKR1Q16570 336 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 WDFY1Q8IWB7 410 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 ZHX1-C8orf76Q96EF9 292 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 KLHL15Q96M94 604 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 MFRPQ9BY79 579 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 SP140LQ9H930 580 aa20.83■□□□□ 0.93
TSEN54-201ENST00000333213 RPL36Q9Y3U8 105 aaKnown RBP20.83■□□□□ 0.93
TSEN54-201ENST00000333213 OR6A2O95222 327 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 CDK1P06493 297 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 PLA2G5P39877 138 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 CDH11P55287 796 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 NCS1P62166 190 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 H3F3AP84243 136 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 IFITM3Q01628 133 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 NIPAL3Q6P499 406 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 IGFL3Q6UXB1 125 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 NHLRC1Q6VVB1 395 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 SLC6A15Q9H2J7 730 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 FANCFQ9NPI8 374 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 CNOT2Q9NZN8 540 aaKnown RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 GRHPRQ9UBQ7 328 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 PCDHGA9Q9Y5G4 932 aaKnown RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 PRR23D1E9PI22 279 aaPredicted RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 RRP8O43159 456 aaKnown RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 APOL3O95236 402 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 GYPBP06028 91 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 PRR23D2P0DMB1 279 aaPredicted RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 SLC2A5P22732 501 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 TRILQ7L0X0 811 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 FAM98AQ8NCA5 519 aaKnown RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 OR9Q1Q8NGQ5 310 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 ZNRF4Q8WWF5 429 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 KISS1RQ969F8 398 aaPredicted RBP20.82■□□□□ 0.92
TSEN54-201ENST00000333213 ADGRG7Q96K78 797 aa20.82■□□□□ 0.92
TSEN54-201ENST00000333213 PRRC2CQ9Y520 2896 aaKnown RBP20.81■□□□□ 0.92
TSEN54-201ENST00000333213 IFNGP01579 166 aa20.81■□□□□ 0.92
TSEN54-201ENST00000333213 ITGB2P05107 769 aa20.81■□□□□ 0.92
TSEN54-201ENST00000333213 SRXN1Q9BYN0 137 aa20.81■□□□□ 0.92
TSEN54-201ENST00000333213 TAS2R16Q9NYV7 291 aa20.81■□□□□ 0.92
TSEN54-201ENST00000333213 KLHL21Q9UJP4 597 aa20.81■□□□□ 0.92
TSEN54-201ENST00000333213 TRAV17A0A0B4J275 112 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 H7C1C5 153 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 SEC14L5O43304 696 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 IGHMP01871 453 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 PIPP12273 146 aaPredicted RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 HTR1FP30939 366 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms