RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C3orf49Q96BT1 292 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 ARHGAP9Q9BRR9 750 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 NARFLQ9H6Q4 476 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 MCUBQ9NWR8 336 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 SSR3Q9UNL2 185 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 GRIP1Q9Y3R0 1128 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CADP27708 2225 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 PRR14LQ5THK1 2151 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CHP2O43745 196 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 GP1BAP07359 652 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 ADRA2AP08913 450 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 SPARCP09486 303 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 IL18Q14116 193 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 FGFBP1Q14512 234 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 NDUFAF7Q7L592 441 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 MRGPREQ86SM8 312 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CCDC32Q9BV29 185 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 RNF121Q9H920 327 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CMAHPQ9Y471 501 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CFAP47Q6ZTR5 3102 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 LAMA5O15230 3695 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 MED13LQ71F56 2210 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 A0A1W2PPL8 197 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 KDM4EB2RXH2 506 aaPredicted RBP14.4□□□□□ -0.1
PDGFB-201ENST00000331163 KLF7O75840 302 aaPredicted RBP14.4□□□□□ -0.1
PDGFB-201ENST00000331163 TSPAN9O75954 239 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 WISP1O95388 367 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 CCNOP22674 350 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 MTNR1AP48039 350 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 DOC2BQ14184 412 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 PON3Q15166 354 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 ASB18Q6ZVZ8 466 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 LSM14AQ8ND56 463 aaKnown RBP14.4□□□□□ -0.1
PDGFB-201ENST00000331163 TRMT61AQ96FX7 289 aaKnown RBP14.4□□□□□ -0.1
PDGFB-201ENST00000331163 WACQ9BTA9 647 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 HDHD2Q9H0R4 259 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF222Q9UK12 451 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 FER1L5A0AVI2 2057 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 PHF3Q92576 2039 aaKnown RBP14.4□□□□□ -0.1
PDGFB-201ENST00000331163 NDUFB2O95178 105 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 THY1P04216 161 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 IGKV3-11P04433 115 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 IL11P20809 199 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 PSMB10P40306 273 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 SLC1A3P43003 542 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 FAPQ12884 760 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 SSX1Q16384 188 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF285Q96NJ3 590 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 LMF2Q9BU23 707 aaKnown RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 B4DXG7 233 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF780AO75290 641 aaPredicted RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 HMGN1P05114 100 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ANKRD34CP0C6C1 535 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 PMP22Q01453 160 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF91Q05481 1191 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF79Q15937 498 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 KIF18BQ86Y91 864 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 KLBQ86Z14 1044 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 CARFQ8N187 725 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 OR5W2Q8NH69 310 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ADIPOR1Q96A54 375 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF224Q9NZL3 707 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 GNG8Q9UK08 70 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 RPL36Q9Y3U8 105 aaKnown RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 KLK4Q9Y5K2 254 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF726A6NNF4 738 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 SLC16A7O60669 478 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 HOXB6P17509 224 aaKnown RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 KIR2DL3P43628 341 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 PGGHGQ32M88 737 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 ARHGDIGQ99819 225 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 WDR77Q9BQA1 342 aaPredicted RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 HINT3Q9NQE9 182 aaKnown RBP14.39□□□□□ -0.11
PDGFB-201ENST00000331163 CDH10Q9Y6N8 788 aa14.39□□□□□ -0.11
PDGFB-201ENST00000331163 IGKV3D-11A0A0A0MRZ8 115 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 NGFRP08138 427 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 HIST1H1CP16403 213 aaKnown RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 P2RX1P51575 399 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 PNLIPRP2P54317 469 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 TAF13Q15543 124 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 EXT1Q16394 746 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SGCAQ16586 387 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 YIF1BQ5BJH7 314 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 CDCP2Q5VXM1 449 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 MCEMP1Q8IX19 187 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SNIP1Q8TAD8 396 aaKnown RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 C12orf4Q9NQ89 552 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ALG5Q9Y673 324 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ZGRF1Q86YA3 2104 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ACAA2P42765 397 aaKnown RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SOX2P48431 317 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SPHARQ15513 63 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 TP53I3Q53FA7 332 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 PLA2G2CQ5R387 149 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF433Q8N7K0 673 aaPredicted RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 OR4Q3Q8NH05 313 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 TAAR8Q969N4 342 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 PPIL3Q9H2H8 161 aaKnown RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF223Q9UK11 482 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms