RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 WDR76Q9H967 626 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 OR6C76A6NM76 312 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 BCAT2O15382 392 aaPredicted RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 GPANK1O95872 356 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 C1QBP02746 253 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 ERP29P30040 261 aaKnown RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 EVI2BP34910 448 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 GZMKP49863 264 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 CBFBQ13951 182 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 Q499Y3 187 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 BCL2L15Q5TBC7 163 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 DPY19L4Q7Z388 723 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SMIM4Q8WVI0 70 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SCMH1Q96GD3 660 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 MNTQ99583 582 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 NIPAL2Q9H841 368 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 FGF21Q9NSA1 209 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 CTSFQ9UBX1 484 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 NUBP2Q9Y5Y2 271 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 V9GY05 133 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 C7orf66A4D0T2 115 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 A6NL46 340 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SCO2O43819 266 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 FADS1O60427 444 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SLC25A12O75746 678 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 TCRBP04435 133 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 ALOX5APP20292 161 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 P2RX1P51575 399 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 YOD1Q5VVQ6 348 aaPredicted RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 COX15Q7KZN9 410 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 MAMDC2Q7Z304 686 aaPredicted RBP13.18□□□□□ -0.3
TPM3-206ENST00000330188 KMT5CQ86Y97 462 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 PLPP5Q8NEB5 264 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 ZFAND1Q8TCF1 268 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 INTS14Q96SY0 518 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 NUDT22Q9BRQ3 303 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 SLA2Q9H6Q3 261 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 AUNIPQ9H7T9 357 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
TPM3-206ENST00000330188 LAMA1P25391 3075 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 ADAM10O14672 748 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 SUSD5O60279 629 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 NPIPB7O75200 414 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 TMEM127O75204 238 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 MT-ATP6P00846 226 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 S100A1P23297 94 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 GIFP27352 417 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 POLR2HP52434 150 aaKnown RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 FOXL2P58012 376 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 EGR3Q06889 387 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 DMWDQ09019 674 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 MAB21L1Q13394 359 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 KLF9Q13886 244 aaPredicted RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 SGCBQ16585 318 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 STPG1Q5TH74 334 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 WDR74Q6RFH5 385 aaPredicted RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 STAC2Q6ZMT1 411 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 FCRLAQ7L513 359 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 ZNF768Q9H5H4 540 aaKnown RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 LIN7BQ9HAP6 207 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 SLC22A11Q9NSA0 550 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 RABL2AQ9UBK7 228 aaPredicted RBP13.17□□□□□ -0.3
TPM3-206ENST00000330188 RABL2BQ9UNT1 228 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 TMED7Q9Y3B3 224 aa13.17□□□□□ -0.3
TPM3-206ENST00000330188 TRABD2BA6NFA1 517 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 OR4C45A6NMZ5 311 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 DHFRP00374 187 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ANKRD34CP0C6C1 535 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ADRA2CP18825 462 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
TPM3-206ENST00000330188 SOX2P48431 317 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 CLDN12P56749 244 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 TNK1Q13470 666 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
TPM3-206ENST00000330188 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 OR2G2Q8NGZ5 317 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 METTL21AQ8WXB1 218 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 GHITMQ9H3K2 345 aa13.16□□□□□ -0.3
TPM3-206ENST00000330188 TCF7L1Q9HCS4 588 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms