RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RAB5BP61020 215 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TBC1D3GQ6DHY5 549 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 C17orf99Q6UX52 265 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 UNQ6126/PRO20091Q6UXV3 157 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 GABRG1Q8N1C3 465 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 PHOSPHO1Q8TCT1 267 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 PPP1R1CQ8WVI7 109 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ING5Q8WYH8 240 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 HSPA12BQ96MM6 686 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF559Q9BR84 538 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 COMMD9Q9P000 198 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TRAV18A0A075B6X5 111 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PEX12O00623 359 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 WNT11O96014 354 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 IGHV2-70P01814 119 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 NGFRP08138 427 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 NID1P14543 1247 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GRPRP30550 384 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 HSD17B2P37059 387 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 SCAND1P57086 179 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 DHRS2Q13268 280 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 COL19A1Q14993 1142 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PON3Q15166 354 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ATPAF1Q5TC12 328 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 C12orf40Q86WS4 652 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GTPBP8Q8N3Z3 284 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PCSK9Q8NBP7 692 aaKnown RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 OR5AP2Q8NGF4 316 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GRHL3Q8TE85 626 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 NUS1Q96E22 293 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 Q96M85 177 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 UPB1Q9UBR1 384 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF780BQ9Y6R6 833 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TRBV5-5A0A0J9YX44 114 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GXYLT2A0PJZ3 443 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PMS2P1A4D2B8 440 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TO15178 435 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 AGR2O95994 175 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 DBIP07108 87 aaKnown RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PRSS3P35030 304 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 CXADRP78310 365 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 PEA15Q15121 130 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF227Q86WZ6 799 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF619Q8N2I2 560 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 ZPLD1Q8TCW7 415 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 LRFN5Q96NI6 719 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 TREM1Q9NP99 234 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 YBX2Q9Y2T7 364 aaKnown RBP11.65□□□□□ -0.54
CCDC60-201ENST00000327554 IER3IP1Q9Y5U9 82 aa11.65□□□□□ -0.54
CCDC60-201ENST00000327554 SCN2AQ99250 2005 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 SPTBP11277 2137 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 NUDT19A8MXV4 375 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 MAS1P04201 325 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 AK4P27144 223 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 CD34P28906 385 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 CAPZA1P52907 286 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 PRDX1Q06830 199 aaKnown RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 OR2L5Q8NG80 312 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 KCNK15Q9H427 330 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 MMP26Q9NRE1 261 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 ADAM18Q9Y3Q7 739 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 CPED1A4D0V7 1026 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 EFCAB7A8K855 629 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 MCIDASD6RGH6 385 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 F8VVB4 439 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 F8VWA3 439 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 RPP14O95059 124 aaKnown RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 PTAFRP25105 342 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 S100PP25815 95 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 PSMD4P55036 377 aaKnown RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 MST1LQ2TV78 715 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 DEFB115Q30KQ5 88 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 FNDC3BQ53EP0 1204 aaKnown RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 LIN54Q6MZP7 749 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 AMZ2Q86W34 360 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 TCEAL8Q8IYN2 117 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 GALNT16Q8N428 558 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 PAQR4Q8N4S7 273 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-201ENST00000327554 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
CCDC60-201ENST00000327554 OR51D1Q8NGF3 324 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms