RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 NEUROG1Q92886 237 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 ZNF566Q969W8 418 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 BPIFA2Q96DR5 249 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 NSMCE2Q96MF7 247 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 MAN2C1Q9NTJ4 1040 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 CD300AQ9UGN4 299 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 V9GYQ6 96 aa12.83□□□□□ -0.36
TUBA3D-201ENST00000321253 F8P00451 2351 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 PRRC2AP48634 2157 aaKnown RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 ARPC4-TTLL3A0A0A6YYG9 625 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 B2RBV5 119 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 SHISA9B4DS77 424 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 MCIDASD6RGH6 385 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 FFAR1O14842 300 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 PIP5K1CO60331 668 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 F13BP05160 661 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 SAGP10523 405 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 MSX2P35548 267 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 MELKQ14680 651 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 FXNQ16595 210 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 HDDC2Q7Z4H3 204 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 NRMQ8IXM6 262 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 CDK20Q8IZL9 346 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 LIPHQ8WWY8 451 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 ACOT11Q8WXI4 607 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 INIPQ9NRY2 104 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 FAIMQ9NVQ4 179 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 CISD1Q9NZ45 108 aaKnown RBP12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 LAMP3Q9UQV4 416 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 POFUT2Q9Y2G5 429 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
TUBA3D-201ENST00000321253 ALPK2Q86TB3 2170 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 hCG_2039718K7EN88 272 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 ARPC2O15144 300 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 TMCC2O75069 709 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 PRSS23O95084 383 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 ITGA2P17301 1181 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 CALB2P22676 271 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 AQP2P41181 271 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 CAPZA2P47755 286 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 DAP3P51398 398 aaKnown RBP12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 SPOCK1Q08629 439 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 CCDC36Q8IYA8 594 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 PYURFQ96I23 114 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 KCNS3Q9BQ31 491 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 NELFAQ9H3P2 528 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 ANKRD19PQ9H560 264 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 NMNAT1Q9HAN9 279 aaPredicted RBP12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 NDUFAF4Q9P032 175 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 ITPR3Q14573 2671 aa12.81□□□□□ -0.36
TUBA3D-201ENST00000321253 EFCAB9A8MZ26 197 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 SEC14L2O76054 403 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 IGHG1P01857 330 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 H1F0P07305 194 aaKnown RBP12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 RHCEP18577 417 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 FUT4P22083 530 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 CLRN1P58418 232 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 RPS4XP62701 263 aaKnown RBP12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 TUBA1BP68363 451 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 TUBA4AP68366 448 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 LSM11P83369 360 aaKnown RBP eCLIP12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 ZNF813Q6ZN06 617 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 MBOAT2Q6ZWT7 520 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 TUBA1AQ71U36 451 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 MOSPD2Q8NHP6 518 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 BCAS4Q8TDM0 211 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 PERPQ96FX8 193 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 SLC38A2Q96QD8 506 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 STX18Q9P2W9 335 aaKnown RBP12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 HIF3AQ9Y2N7 669 aa12.8□□□□□ -0.36
TUBA3D-201ENST00000321253 A0A087WUU8 490 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 ARID1AO14497 2285 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 HIVEP1P15822 2718 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 MAKP20794 623 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 PRKCDQ05655 676 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 LAPTM4AQ15012 233 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 ALG10Q5BKT4 473 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 OAFQ86UD1 273 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 ARHGAP24Q8N264 748 aa12.79□□□□□ -0.36
TUBA3D-201ENST00000321253 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms