RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 A0A1W2PQ72 361 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 UPK3AO75631 287 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 SELENOPP49908 381 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 CCR5P51681 352 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 Q499Y3 187 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 PWWP2BQ6NUJ5 590 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 Q6ZTK2 550 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF767PQ75MW2 155 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF440Q8IYI8 595 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 OR11G2Q8NGC1 345 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 AMELYQ99218 206 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 GAL3ST1Q99999 423 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 KLHL9Q9P2J3 617 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 SHISA7A6NL88 538 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ANXA2P2A6NMY6 339 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ANXA2P07355 339 aaKnown RBP15.81■□□□□ 0.12
COL9A1-201ENST00000320755 OR3A3P47888 321 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 NR0B1P51843 470 aaKnown RBP15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ANGPT1Q15389 498 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 OR2T4Q8NH00 348 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ATOH1Q92858 354 aaPredicted RBP15.81■□□□□ 0.12
COL9A1-201ENST00000320755 TMEM106AQ96A25 262 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 TMEM150CB9EJG8 249 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 PSMB1P20618 241 aaKnown RBP15.81■□□□□ 0.12
COL9A1-201ENST00000320755 CXCR1P25024 350 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ADH7P40394 386 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 HSF2Q03933 536 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 VWA2Q5GFL6 755 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF684Q5T5D7 378 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 PPP1R14AQ96A00 147 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 SLC19A3Q9BZV2 496 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 TAS2R10Q9NYW0 307 aa15.81■□□□□ 0.12
COL9A1-201ENST00000320755 DOK2O60496 412 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 PEX14O75381 377 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 ASAH2BP0C7U1 165 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 ELOCQ15369 112 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 SHISA6Q6ZSJ9 500 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 LRRC75AQ8NAA5 344 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 KCNG2Q9UJ96 466 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 MEIS3P1A6NDR6 274 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 GSTZ1O43708 216 aaPredicted RBP15.8■□□□□ 0.12
COL9A1-201ENST00000320755 RORAP35398 523 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 RAD52P43351 418 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 PTH2RP49190 550 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 ART1P52961 327 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF117Q03924 483 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 DYRK1AQ13627 763 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 IL10RAQ13651 578 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 SERTAD2Q14140 314 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 RAB30Q15771 203 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 C1orf189Q5VU69 101 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 LRRN1Q6UXK5 716 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 KCNK15Q9H427 330 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 FOXJ3Q9UPW0 622 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 SLC6A5Q9Y345 797 aa15.8■□□□□ 0.12
COL9A1-201ENST00000320755 IL33O95760 270 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 MYF5P13349 255 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 IL12BP29460 328 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 PPICP45877 212 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ARL4DP49703 201 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 P2RX1P51575 399 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 PER3P56645 1201 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ZP1P60852 638 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 CAMK2DQ13557 499 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ZBTB37Q5TC79 503 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 OR5M10Q6IEU7 315 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 BAIAP2L2Q6UXY1 529 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 GPX7Q96SL4 187 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 CUTCQ9NTM9 273 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 GABARAPH6UMI1 98 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 RENP00797 406 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 GUSBP08236 651 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ANXA7P20073 488 aaKnown RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 BIKQ13323 160 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 LGALSLQ3ZCW2 172 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 FNDC7Q5VTL7 733 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 SLC6A19Q695T7 634 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 GLB1L2Q8IW92 636 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF680Q8NEM1 530 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 OR2G2Q8NGZ5 317 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 LCORQ96JN0 433 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 NOX3Q9HBY0 568 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 DLL4Q9NR61 685 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 RPL6Q02878 288 aaKnown RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 POU4F3Q15319 338 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 YOD1Q5VVQ6 348 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 HLA-DQA1Q5Y7H0 255 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 TEX261Q6UWH6 196 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 KDM8Q8N371 416 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 EXD3Q8N9H8 876 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 UXS1Q8NBZ7 420 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 FAM71CQ8NEG0 241 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 TSTD1Q8NFU3 115 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 TSEN15Q8WW01 171 aaKnown RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF578Q96N58 590 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-201ENST00000320755 NUDT9Q9BW91 350 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 LANCL2Q9NS86 450 aa15.79■□□□□ 0.12
COL9A1-201ENST00000320755 ZNF69Q9UC07 566 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms