RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CCDC58Q4VC31 144 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 CRTC2Q53ET0 693 aaPredicted RBP16.03■□□□□ 0.16
RAB39A-201ENST00000320578 VASNQ6EMK4 673 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 MDGA2Q7Z553 956 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 BEST3Q8N1M1 668 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 ASB10Q8WXI3 467 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 BORCS5Q969J3 196 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 MIB2Q96AX9 1013 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 SYT4Q9H2B2 425 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 SRA1Q9HD15 236 aaKnown RBP16.03■□□□□ 0.16
RAB39A-201ENST00000320578 PALMDQ9NP74 551 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 STMN3Q9NZ72 180 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 ABI3Q9P2A4 366 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 B9D1Q9UPM9 204 aa16.03■□□□□ 0.16
RAB39A-201ENST00000320578 SLC22A23A1A5C7 686 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 CENPBD1B2RD01 187 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 OGG1O15527 345 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 SELENOFO60613 162 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 SERPINI2O75830 405 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 PMS2P2O95744 297 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 CEACAM1P13688 526 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 CRABP1P29762 137 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 NAA10P41227 235 aaPredicted RBP16.02■□□□□ 0.16
RAB39A-201ENST00000320578 MRPL28Q13084 256 aaKnown RBP16.02■□□□□ 0.16
RAB39A-201ENST00000320578 ZNF227Q86WZ6 799 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 IL22RA1Q8N6P7 574 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 KIAA1143Q96AT1 154 aaPredicted RBP16.02■□□□□ 0.16
RAB39A-201ENST00000320578 WDR12Q9GZL7 423 aaKnown RBP16.02■□□□□ 0.16
RAB39A-201ENST00000320578 HMG20AQ9NP66 347 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 IL17BQ9UHF5 180 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 MRPS18BQ9Y676 258 aaKnown RBP16.02■□□□□ 0.16
RAB39A-201ENST00000320578 TMEM14AQ9Y6G1 99 aa16.02■□□□□ 0.16
RAB39A-201ENST00000320578 CLDN25C9JDP6 229 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 NPIPA5E9PKD4 350 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 J3QLW9 94 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DCTN6O00399 190 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 PHYHO14832 338 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ZNF19P17023 458 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 CNR1P21554 472 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 P2RY4P51582 365 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 GBX2P52951 348 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 OR12D2P58182 307 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 SLC35A1P78382 337 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 HSF1Q00613 529 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 FABP5Q01469 135 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ZNF846Q147U1 533 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ZNF684Q5T5D7 378 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DMKNQ6E0U4 476 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TMPPEQ6ZT21 453 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 SSX6Q7RTT6 188 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 HDDC2Q7Z4H3 204 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 CDC20BQ86Y33 519 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 PM20D2Q8IYS1 436 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 GHDCQ8N2G8 530 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 SNX33Q8WV41 574 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 C5orf34Q96MH7 638 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 GNRHR2Q96P88 292 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TSSK2Q96PF2 358 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 PIGQQ9BRB3 760 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 NUAK2Q9H093 628 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 AKIP1Q9NQ31 210 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 FAM86C1Q9NVL1 165 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DKKL1Q9UK85 242 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 NPIPA1Q9UND3 350 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 IGLV1-36A0A0B4J1U3 117 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 HSPB2A8KAH6 182 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TM4SF5O14894 197 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 PLGP00747 810 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 OPRL1P41146 370 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 CASRP41180 1078 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 RORCP51449 518 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 RAC1P63000 192 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DBPQ10586 325 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 HSPB2Q16082 182 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ABHD17BQ5VST6 288 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DNM1P34Q6PK57 102 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 PLEKHG7Q6ZR37 379 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 SLC35D2Q76EJ3 337 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 MS4A15Q8N5U1 240 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ZFP41Q8N8Y5 198 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 ZNF511Q8NB15 262 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TMEM203Q969S6 136 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 DNAJA3Q96EY1 480 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 KLHL15Q96M94 604 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 OR5B2Q96R09 309 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TM9SF2Q99805 663 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 TSPAN10Q9H1Z9 355 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 KCNN2Q9H2S1 579 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 WDR76Q9H967 626 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 COPS3Q9UNS2 423 aa16.01■□□□□ 0.15
RAB39A-201ENST00000320578 SIRT4Q9Y6E7 314 aaPredicted RBP16.01■□□□□ 0.15
RAB39A-201ENST00000320578 GJE1A6NN92 205 aa16■□□□□ 0.15
RAB39A-201ENST00000320578 PROB1E7EW31 1015 aa16■□□□□ 0.15
RAB39A-201ENST00000320578 RPS19P39019 145 aaKnown RBP16■□□□□ 0.15
RAB39A-201ENST00000320578 TGM4P49221 684 aa16■□□□□ 0.15
RAB39A-201ENST00000320578 SOX8P57073 446 aa16■□□□□ 0.15
RAB39A-201ENST00000320578 TMEM176BQ3YBM2 270 aaPredicted RBP16■□□□□ 0.15
RAB39A-201ENST00000320578 C22orf42Q6IC83 251 aa16■□□□□ 0.15
RAB39A-201ENST00000320578 RPL22L1Q6P5R6 122 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms