RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 DHRS2Q13268 280 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ELOCQ15369 112 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 EIF2S3LQ2VIR3 472 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 HNRNPA1L2Q32P51 320 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 DCAF12L2Q5VW00 463 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF704Q6ZNC4 412 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ERN2Q76MJ5 926 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF584Q8IVC4 421 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 COL26A1Q96A83 441 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SCLYQ96I15 445 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ADAD1Q96M93 576 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MMP26Q9NRE1 261 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 DNAJB11Q9UBS4 358 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SLC27A6Q9Y2P4 619 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF337Q9Y3M9 751 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ANKRD36A6QL64 1941 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FEZF1A0PJY2 475 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZC3H12DA2A288 527 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR6C74A6NCV1 312 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ELOA3DA6NLF2 546 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SLC25A12O75746 678 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FUT1P19526 365 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CASRP41180 1078 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RABIFP47224 123 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CD81P60033 236 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PRKCZQ05513 592 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ELOA3BQ3SY89 546 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FAM76BQ5HYJ3 339 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF684Q5T5D7 378 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ARHGAP40Q5TG30 622 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 C5orf46Q6UWT4 87 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 LYG2Q86SG7 212 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM25Q86YD3 366 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ELOA3Q8NG57 546 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR7G2Q8NG99 324 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ASB17Q8WXJ9 295 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PIK3IP1Q96FE7 263 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PEX11GQ96HA9 241 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM41AQ96HV5 264 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SERINC2Q96SA4 455 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 EGLN1Q9GZT9 426 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TUBA4BQ9H853 241 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TRAV27A0A087WT01 109 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 LYPD3O95274 346 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 WNT11O96014 354 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 HLA-AP01891 365 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 IFNA6P05013 189 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FABP1P07148 127 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADH1AP07327 375 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CD14P08571 375 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 MST1P26927 711 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 BCL6P41182 706 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CCINQ13939 588 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 INPP5JQ15735 1006 aaPredicted RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 EMC4Q5J8M3 183 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FAM111BQ6SJ93 734 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TMED4Q7Z7H5 227 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 BPIFB2Q8N4F0 458 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 OR5AP2Q8NGF4 316 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NRIP2Q9BQI9 281 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TMPRSS5Q9H3S3 457 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CHMP1AQ9HD42 196 aaPredicted RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SLC2A8Q9NY64 477 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1W2PPV9 198 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 EIF1BO60739 113 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FBXO24O75426 580 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 GPR75O95800 540 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ITGB8P26012 769 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADH6P28332 368 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 EIF1P41567 113 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SOX2P48431 317 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 EGR3Q06889 387 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TCEA2Q15560 299 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 DUSP5Q16690 384 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 LY6G6FQ5SQ64 297 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PHF19Q5T6S3 580 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ZSCAN1Q8NBB4 408 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NLGN2Q8NFZ4 835 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 DCBLD2Q96PD2 775 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SLC46A2Q9BY10 475 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADAM19Q9H013 955 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CCDC86Q9H6F5 360 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FBXL4Q9UKA2 621 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF208O43345 1280 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FADS1O60427 444 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NKX2-2O95096 273 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 GYPBP06028 91 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PSMB10P40306 273 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ARL6IP1Q15041 203 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF600Q6ZNG1 722 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 STX12Q86Y82 276 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SDR9C7Q8NEX9 313 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 OR52B4Q8NGK2 314 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PPP1R1CQ8WVI7 109 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 COX14Q96I36 57 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TAAR9Q96RI9 348 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NTNG1Q9Y2I2 539 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms