RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CACNG2Q9Y698 323 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PCNX3Q9H6A9 2034 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 NPIPB9F8W1W9 429 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 LGALS8O00214 317 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF264O43296 627 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 OR7A10O76100 309 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 STOMP27105 288 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 SLC6A1P30531 599 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PYCR1P32322 319 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 STAT5AP42229 794 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 PPICP45877 212 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 CDONQ4KMG0 1287 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TP53I3Q53FA7 332 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 CREB3L2Q70SY1 520 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 OR2T35Q8NGX2 323 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 OR5J2Q8NH18 312 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 C3orf49Q96BT1 292 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 C4orf36Q96KX1 117 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 DDOQ99489 341 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 KCNJ15Q99712 375 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF649Q9BS31 505 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 CRB3Q9BUF7 120 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ULBP3Q9BZM4 244 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 OR51J1Q9H342 316 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 METTL17Q9H7H0 456 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 ING1Q9UK53 422 aaPredicted RBP6.91□□□□□ -1.3
TRIM55-202ENST00000315962 POLHQ9Y253 713 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
TRIM55-202ENST00000315962 TRBV11-1A0A0K0K1C0 115 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 DAPL1A0PJW8 107 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 OR2J2O76002 312 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 AK1P00568 194 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 TCRBP04435 133 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 TDGF1P13385 188 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PSMB10P40306 273 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 RNF4P78317 190 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 DCDP81605 110 aaKnown RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 FHL1Q13642 323 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 MELKQ14680 651 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PLA1AQ53H76 456 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PRAMEF20Q5VT98 475 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 AADACL4Q5VUY2 407 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 RHBDD2Q6NTF9 364 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SFXN4Q6P4A7 337 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM65Q6PI78 240 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PAPD4Q6PIY7 484 aaKnown RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SLC29A4Q7RTT9 530 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 FTMTQ8N4E7 242 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 TOMM5Q8N4H5 51 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 APCDD1LQ8NCL9 501 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 GALNT11Q8NCW6 608 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 OR1N1Q8NGS0 311 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 METTL21AQ8WXB1 218 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 THAP4Q8WY91 577 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 HYLS1Q96M11 299 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 Q96M85 177 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 DERL3Q96Q80 235 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 OR1F2PQ96R84 312 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SOSTQ9BQB4 213 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SEC22CQ9BRL7 303 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 CACNG6Q9BXT2 260 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 OR10A4Q9H209 315 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 MED11Q9P086 117 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 KCNN3Q9UGI6 736 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 EXOSC1Q9Y3B2 195 aaKnown RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PCDHGB7Q9Y5F8 929 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 RTTNQ86VV8 2226 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 CACNA1GO43497 2377 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 IGKV1D-42A0A075B6H8 117 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PRR23D1E9PI22 279 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 H3BML4 177 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 GMDSO60547 372 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 FZD7O75084 574 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 UCHL1P09936 223 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PRR23D2P0DMB1 279 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 DNASE1P24855 282 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ARHGDIBP52566 201 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 EMP2P54851 167 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 EGR4Q05215 589 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SKP2Q13309 424 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF141Q15928 474 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ODF4Q2M2E3 257 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SFRP5Q5T4F7 317 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 HES5Q5TA89 166 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 MZT2AQ6P582 158 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF613Q6PF04 617 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ARSKQ6UWY0 536 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 Q6ZTK2 550 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF767PQ75MW2 155 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 SPERTQ8NA61 448 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 OR2T4Q8NH00 348 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 DNAJA4Q8WW22 397 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 MR1Q95460 341 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms