RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CCL4P13236 92 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 EMP2P54851 167 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 DCDP81605 110 aaKnown RBP11.25□□□□□ -0.61
RNF4-201ENST00000314289 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 COL28A1Q2UY09 1125 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 MESTQ5EB52 335 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 TIGD3Q6B0B8 471 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 HIST3H2AQ7L7L0 130 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 PPP1R3BQ86XI6 285 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 METTL21AQ8WXB1 218 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 HIST1H2ACQ93077 130 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 HIF3AQ9Y2N7 669 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 KLHDC2Q9Y2U9 406 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 URB1O60287 2271 aaKnown RBP11.25□□□□□ -0.61
RNF4-201ENST00000314289 NUP210LQ5VU65 1888 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ANKRD61A6NGH8 418 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 SEC14L5O43304 696 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 CD14P08571 375 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 SDHBP21912 280 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 DIO1P49895 249 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 CLDN20P56880 219 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 SLC25A35Q3KQZ1 300 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ACSM3Q53FZ2 586 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ESCO2Q56NI9 601 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 FAM205BPQ63HN1 556 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 CREB3L2Q70SY1 520 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 FAM122BQ7Z309 247 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 PLPP5Q8NEB5 264 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 OR4D9Q8NGE8 314 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 KIAA1143Q96AT1 154 aaPredicted RBP11.25□□□□□ -0.61
RNF4-201ENST00000314289 DDOQ99489 341 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 CRB3Q9BUF7 120 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 JAM3Q9BX67 310 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 ADAM19Q9H013 955 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
RNF4-201ENST00000314289 FABP7O15540 132 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 SUSD5O60279 629 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 CELA2AP08217 269 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 GP1BBP13224 206 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 DCAF7P61962 342 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ARSKQ6UWY0 536 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 PM20D2Q8IYS1 436 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 OR6V1Q8N148 313 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ZNF441Q8N8Z8 693 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 SPERTQ8NA61 448 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 AKAP1Q92667 903 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF4-201ENST00000314289 OR14A2Q96R54 314 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TMEM43Q9BTV4 400 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 MED18Q9BUE0 208 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 PPP1R3EQ9H7J1 279 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 WDR76Q9H967 626 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
RNF4-201ENST00000314289 SUSD2Q9UGT4 822 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 EML6Q6ZMW3 1958 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TRBV2A0A0J9YWF9 115 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ARPC3O15145 178 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 PLPP2O43688 288 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 FADS1O60427 444 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 OR8G3PP0DMU2 310 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 EDNRAP25101 427 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 PNLIPRP2P54317 469 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 LINC01590Q5TEZ4 76 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 SLC19A3Q9BZV2 496 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 HAO2Q9NYQ3 351 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TAS2R5Q9NYW4 299 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 NCDNQ9UBB6 729 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ZNF222Q9UK12 451 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TMED7-TICAM2A0A0A6YYA0 188 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 GDI2P50395 445 aaKnown RBP11.24□□□□□ -0.61
RNF4-201ENST00000314289 AGFG1P52594 562 aaKnown RBP11.24□□□□□ -0.61
RNF4-201ENST00000314289 CLDN6P56747 220 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 NRG3P56975 720 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 FOXK1P85037 733 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 MELKQ14680 651 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 BCL2L15Q5TBC7 163 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ADGRG3Q86Y34 549 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 THAP4Q8WY91 577 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TMEM185BQ9H7F4 350 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 ST6GALNAC2Q9UJ37 374 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 RASD1Q9Y272 281 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
RNF4-201ENST00000314289 TRAV6A0A075B6T7 132 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 H3BML4 177 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 OR2T7P0C7T2 308 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 HLA-DOBP13765 273 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 PGCP20142 388 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 SDHAP31040 664 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ZXDAP98168 799 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 CBFBQ13951 182 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms