RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BMFQ96LC9 184 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SIGLEC11Q96RL6 698 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 ADAT1Q9BUB4 502 aaKnown RBP11.62□□□□□ -0.55
RETREG3-201ENST00000309428 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 UPB1Q9UBR1 384 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 MAFFQ9ULX9 164 aa11.62□□□□□ -0.55
RETREG3-201ENST00000309428 MPC2O95563 127 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 TACSTD2P09758 323 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF28P17035 718 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 CD34P28906 385 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 EMDP50402 254 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 GFERP55789 205 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 OR7A5Q15622 319 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 GSG1Q2KHT4 349 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF765Q7L2R6 523 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 RBP7Q96R05 134 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ADOQ96SZ5 270 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 POMT2Q9UKY4 750 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 DAPP1Q9UN19 280 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 SLC35A3Q9Y2D2 325 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 A0A0B4J2A0 478 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 A0A1B0GTH9 108 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ACOT7O00154 380 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ACTC1P68032 377 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ACTA1P68133 377 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 LTBQ06643 244 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ARFRP1Q13795 201 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 OR10K2Q6IF99 312 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 OR5AK2Q8NH90 309 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM106AQ96A25 262 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 LINC00615Q96LM1 132 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 GAS2L1Q99501 681 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 CRB3Q9BUF7 120 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 RAB11FIP5Q9BXF6 653 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 RXFP3Q9NSD7 469 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 SHPKQ9UHJ6 478 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 CBLCQ9ULV8 474 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 FITM1A5D6W6 292 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 PYCARD-AS1I3L0S3 204 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 FBXO24O75426 580 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 CDK2P24941 298 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 FGF9P31371 208 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 HYAL1Q12794 435 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF770Q6IQ21 691 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 LCN10Q6JVE6 187 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 CHMP1AQ9HD42 196 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-201ENST00000309428 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 NTMQ9P121 344 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 DTX4Q9Y2E6 619 aa11.61□□□□□ -0.55
RETREG3-201ENST00000309428 HLA-AP01891 365 aaKnown RBP11.6□□□□□ -0.55
RETREG3-201ENST00000309428 RRASP10301 218 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 CTXN1P60606 82 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 RPS15AP62244 130 aaKnown RBP11.6□□□□□ -0.55
RETREG3-201ENST00000309428 MBOAT2Q6ZWT7 520 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 YIPF5Q969M3 257 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 KLF15Q9UIH9 416 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 CAMK2AQ9UQM7 478 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 IGF2P01344 180 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 TNFP01375 233 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 PPP3CBP16298 524 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 FCARP24071 287 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 CXADRP78310 365 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 DGAT2Q96PD7 388 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 FKRPQ9H9S5 495 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 FGF20Q9NP95 211 aaPredicted RBP11.6□□□□□ -0.55
RETREG3-201ENST00000309428 FBXL21Q9UKT6 434 aa11.6□□□□□ -0.55
RETREG3-201ENST00000309428 A0A1B0GWA3 101 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 HCRTR2O43614 444 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 SRMP19623 302 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 UBE2IP63279 158 aaKnown RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CDK5Q00535 292 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CAMK2DQ13557 499 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CBFBQ13951 182 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 NFATC4Q14934 902 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 HLA-DQA1Q5Y7H0 255 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 PLPP7Q8NBV4 271 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 PXT1Q8NFP0 134 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 GAL3ST3Q96A11 431 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 KIR3DX1Q9H7L2 352 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CA10Q9NS85 328 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ABRACLQ9P1F3 81 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 FBXO4Q9UKT5 387 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ADRB1P08588 477 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 TFPIP10646 304 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 EPXP11678 715 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 FPR3P25089 353 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 HTR2AP28223 471 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CSNK1EP49674 416 aaKnown RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ZIC1Q15915 447 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 FAM69BQ5VUD6 431 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms