RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 HNRNPA0Q13151 305 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 RNPS1Q15287 305 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 AANATQ16613 207 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BTNL8Q6UX41 500 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BBS1Q8NFJ9 593 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SMIM4Q8WVI0 70 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MIOXQ9UGB7 285 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 KCTD3Q9Y597 815 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TRABD2BA6NFA1 517 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FZD7O75084 574 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 C6orf47O95873 294 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BPIFB3P59826 476 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DSC1Q08554 894 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SFT2D3Q587I9 215 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FBXO46Q6PJ61 603 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 SYT9Q86SS6 491 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SLC38A6Q8IZM9 456 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 OR1L6Q8NGR2 347 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RAB40CQ96S21 281 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 KCNK12Q9HB15 430 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PCDHGA5Q9Y5G8 931 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 KLRC4-KLRK1H3BQV0 150 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PIAS1O75925 651 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GLCEO94923 617 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TCN2P20062 427 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GPR4P46093 362 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PLCXD2Q0VAA5 305 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 UNC50Q53HI1 259 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TMEM151AQ8N4L1 468 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF561Q8N587 486 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ANKRD9Q96BM1 317 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 MUCL1Q96DR8 90 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RNF2Q99496 336 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CFHR5Q9BXR6 569 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PCDHAC1Q9H158 963 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MIR1-1HGQ9H1L0 117 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 OR52D1Q9H346 318 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CMC2Q9NRP2 79 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 UFSP2Q9NUQ7 469 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BRWD3Q6RI45 1802 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZSCAN5BA6NJL1 495 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 K7EPK0 472 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 LEFTY2O00292 366 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MSI1O43347 362 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 LMO2P25791 158 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RACK1P63244 317 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 PCGF3Q3KNV8 242 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GPBAR1Q8TDU6 330 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ADTRPQ96IZ2 230 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF75AQ96N20 296 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 EGLN1Q9GZT9 426 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 FBRSL1Q9HCM7 1045 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 INIPQ9NRY2 104 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 IL20RAQ9UHF4 553 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TPRP12270 2363 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF705EA8MWA4 302 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 GMDSO60547 372 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DDNO94850 711 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 IL33O95760 270 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 AQP2P41181 271 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 IQCJQ1A5X6 159 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CNIH2Q6PI25 160 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TFAP2EQ6VUC0 442 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RNF11Q9Y3C5 154 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 V9GYS6 101 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF850A8MQ14 1090 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ARPC3O15145 178 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 GPM6BQ13491 265 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 APOFQ13790 326 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SUMF2Q8NBJ7 301 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 MARC2Q969Z3 335 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 CLIP3Q96DZ5 547 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DAZAP1Q96EP5 407 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 CBY3A6NI87 242 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SPINT2O43291 252 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 DUS4LO95620 317 aaKnown RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 RHOP08100 348 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 BCKDHBP21953 392 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SFTPDP35247 375 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 THBS4P35443 961 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 NAA10P41227 235 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 SLC25A1P53007 311 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 RPE65Q16518 533 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 C6orf183Q5T699 404 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 SAXO2Q658L1 398 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 IGSF5Q9NSI5 407 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 EMC9Q9Y3B6 208 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 TIMM13Q9Y5L4 95 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF318Q5VUA4 2279 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 KDM4FA0A1W2PPD8 638 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 A0A1W2PPV4 95 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 F5H423 210 aaPredicted RBP3.72□□□□□ -1.81
USH2A-201ENST00000307340 ST8SIA3O43173 380 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ZNF17P17021 662 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 PAX6P26367 422 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 AQP1P29972 269 aa3.72□□□□□ -1.81
USH2A-201ENST00000307340 ADH7P40394 386 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms