RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 COL12A1Q99715 3063 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TCRBV3S1A0A5B6 114 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 UNC119BA6NIH7 251 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NPIPB13A6NJU9 1138 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR5H1A6NKK0 313 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NPIPB4C9JG80 1138 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 M0R3G1 203 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CDC42EP2O14613 210 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF432O94892 652 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NDUFB2O95178 105 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TSPAN19P0C672 248 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CRYGSP22914 178 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OMPP47874 163 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ERFP50548 548 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CTXN1P60606 82 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 UBE2NP61088 152 aaKnown RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPS4XP62701 263 aaKnown RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PPA1Q15181 289 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SEC23BQ15437 767 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FAM205BPQ63HN1 556 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 IGFN1Q86VF2 1251 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C20orf196Q8IYI0 205 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NOXO1Q8NFA2 376 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FANK1Q8TC84 345 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GNPDA2Q8TDQ7 276 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ASB10Q8WXI3 467 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC25A44Q96H78 314 aaPredicted RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TXNDC15Q96J42 360 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TXNIPQ9H3M7 391 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CRLF2Q9HC73 371 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 AMDHD2Q9Y303 409 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MAGED1Q9Y5V3 778 aaPredicted RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 U3KQV3 271 aa9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 HEATR1Q9H583 2144 aaKnown RBP9.68□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CENPBD1B2RD01 187 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPL36A-HNRNPH2H7BZ11 118 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PDLIM1O00151 329 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FKBP6O75344 327 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ENTPD5O75356 428 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 E2F6O75461 281 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 WNT11O96014 354 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FPR3P25089 353 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LIMS1P48059 325 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NR1H2P55055 460 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FOXG1P55316 489 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CD47Q08722 323 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LAPTM4AQ15012 233 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TAB1Q15750 504 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GABRA6Q16445 453 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ACKR1Q16570 336 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CEACAM16Q2WEN9 425 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 BEX5Q5H9J7 111 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ASRGL1Q7L266 308 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR9Q2Q8NGE9 314 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR1K1Q8NGR3 316 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR52N5Q8NH56 324 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PIK3IP1Q96FE7 263 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF570Q96NI8 536 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TNFRSF13CQ96RJ3 184 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FUZQ9BT04 418 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CLEC4MQ9H2X3 399 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GPR35Q9HC97 309 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC17A5Q9NRA2 495 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GLTPQ9NZD2 209 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SIGLEC7Q9Y286 467 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 POFUT2Q9Y2G5 429 aa9.67□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ANKHD1Q8IWZ3 2542 aaKnown RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ALPK2Q86TB3 2170 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 A6NIZ1 184 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF99A8MXY4 864 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 XKRYO14609 159 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 DEAF1O75398 565 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CTAG2O75638 210 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TRMUO75648 421 aaKnown RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 IGHMP01871 453 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 THBDP07204 575 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PGA4P0DJD7 388 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PGA3P0DJD8 388 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PRF1P14222 555 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ACADSP16219 412 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC6A6P31641 620 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ACVR1BP36896 505 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF84P51523 738 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPS6KA3P51812 740 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ARHGDIAP52565 204 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RAP1BP61224 184 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPL27P61353 136 aaKnown RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RAP1AP62834 184 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PPP1R8Q12972 351 aaKnown RBP9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MICAQ29983 383 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C1QTNF12Q5T7M4 302 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPL13AP3Q6NVV1 102 aa9.66□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PGBD2Q6P3X8 592 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms