RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GIPP09681 153 aaPredicted RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 MAOAP21397 527 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 RPS27AP62979 156 aaKnown RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 UBA52P62987 128 aaKnown RBP12.2□□□□□ -0.46
DDX54-201ENST00000306014 CBFBQ13951 182 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 TMEM244Q5VVB8 128 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 LCN10Q6JVE6 187 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 FAM122CQ6P4D5 195 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 C17orf47Q8NEP4 570 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 RADILQ96JH8 1075 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 GPA33Q99795 319 aa12.2□□□□□ -0.46
DDX54-201ENST00000306014 EFCAB7A8K855 629 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 HTR3BO95264 441 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 APOC1P02654 83 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 NR2C1P13056 603 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 IFNGR1P15260 489 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 GLP1RP43220 463 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 TNK1Q13470 666 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 GLYR1Q49A26 553 aaPredicted RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 SLC51BQ86UW2 128 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 PM20D2Q8IYS1 436 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SYS1Q8N2H4 156 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 TMEM156Q8N614 296 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SCARB1Q8WTV0 552 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 CDC6Q99741 560 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 ALPK2Q86TB3 2170 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 ZNF850A8MQ14 1090 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 TBX19O60806 448 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 TP53P04637 393 aaPredicted RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 TPT1P13693 172 aaKnown RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 HERV-K104P61576 105 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 IFITM2Q01629 132 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 ABI3BPQ7Z7G0 1075 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 OR1J4Q8NGS1 313 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 ASB16Q96NS5 453 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 LRIT1Q9P2V4 623 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 BORCS7-ASMTA0A0B4J1R7 106 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 A0A0D9SG52 128 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 A0A1W2PS29 197 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 H7C417 338 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 P2RX6O15547 441 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SEMG1P04279 462 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 RAB5BP61020 215 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SLC22A6Q4U2R8 563 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SLC35D3Q5M8T2 416 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 SLC16A9Q7RTY1 509 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 LIX1LQ8IVB5 337 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 ZNF595Q8IYB9 648 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 IL17RCQ8NAC3 791 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 MORN4Q8NDC4 146 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 CGGBP1Q9UFW8 167 aaPredicted RBP12.19□□□□□ -0.46
DDX54-201ENST00000306014 SLC22A7Q9Y694 548 aa12.19□□□□□ -0.46
DDX54-201ENST00000306014 FITM1A5D6W6 292 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 DNAJB6O75190 326 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 GAAP10253 952 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 RAB3AP20336 220 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 MMP15P51511 669 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 KRBOX4Q5JUW0 171 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
DDX54-201ENST00000306014 TRAPPC6BQ86SZ2 158 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 OR51Q1Q8NH59 317 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 CD207Q9UJ71 328 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 SPTBP11277 2137 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 SCGNO76038 276 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 M6PRP20645 277 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 IL32P24001 234 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 EMP2P54851 167 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 POU3F1Q03052 451 aaPredicted RBP12.18□□□□□ -0.46
DDX54-201ENST00000306014 ZP2Q05996 745 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 GPNMBQ14956 572 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 SLC9A3R2Q15599 337 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 ST3GAL2Q16842 350 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 NLRC3Q7RTR2 1065 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 PXT1Q8NFP0 134 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 MFSD8Q8NHS3 518 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 RNF170Q96K19 258 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 RNF32Q9H0A6 362 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 ERVMER34-1Q9H9K5 563 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 LYRM4Q9HD34 91 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 PLXNB2O15031 1838 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 CXorf51AA0A1B0GTR3 108 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 PRAMEF26H0Y7S4 382 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 CCSO14618 274 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 WNT1P04628 370 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 CEACAM5P06731 702 aa12.18□□□□□ -0.46
DDX54-201ENST00000306014 NUDT1P36639 197 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms