RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PMP2P02689 132 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CPN1P15169 458 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 AGFG1P52594 562 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 CLDN2P57739 230 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PRAMEF20Q5VT98 475 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 PRAMEF6Q5VXH4 476 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SIGLECL1Q8N7X8 197 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 NEIL2Q969S2 332 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 ZC3HAV1LQ96H79 300 aaKnown RBP9.64□□□□□ -0.87
CLIP1-201ENST00000302528 TAS2R5Q9NYW4 299 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 IL37Q9NZH6 218 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
CLIP1-201ENST00000302528 MYH2Q9UKX2 1941 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF587BE7ETH6 402 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ARPC3O15145 178 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LGI1O95970 557 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 PDGFBP01127 241 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 RAB7AP51149 207 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SSR4P51571 173 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 GSCP56915 257 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 OR5I1Q13606 314 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 MFSD12Q6NUT3 480 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LGI3Q8N145 548 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SLC30A3Q99726 388 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SEMA4GQ9NTN9 838 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 PARP4Q9UKK3 1724 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 H7C1C5 153 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF264O43296 627 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SULT1C4O75897 302 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 MEOX1P50221 254 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LCN6P62502 163 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 KCNJ10P78508 379 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ERV3-1Q14264 604 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ADGRG3Q86Y34 549 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.872e-6■■■■□ 20.7
CLIP1-201ENST00000302528 EMG1Q92979 244 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 H7BYZ3 331 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SIGLEC6O43699 453 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 EDN1P05305 212 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 CPMP14384 443 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 HNF1AP20823 631 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 MLF1P58340 268 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 DCAF12Q5T6F0 453 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ADAM5Q6NVV9 412 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ENTHD1Q8IYW4 607 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 OR13C2Q8NGS9 318 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LILRB4Q8NHJ6 448 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SEC22CQ9BRL7 303 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 CDCP1Q9H5V8 836 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM72A0PK05 275 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ABCD4O14678 606 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 OR5G3P0C626 314 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SDC1P18827 310 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 ECI1P42126 302 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 TBC1D28Q2M2D7 210 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 GPRIN1Q7Z2K8 1008 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 SLC22A24Q8N4F4 322 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 LMNTD1Q8N9Z9 388 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 OR5M8Q8NGP6 311 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 IKZF5Q9H5V7 419 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 NTN4Q9HB63 628 aa9.63□□□□□ -0.87
CLIP1-201ENST00000302528 EXOSC3Q9NQT5 275 aaKnown RBP9.63□□□□□ -0.87
CLIP1-201ENST00000302528 DOK2O60496 412 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 IL4RP24394 825 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 OPRD1P41143 372 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TAS2R45P59539 299 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 PITX1P78337 314 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 LGALS14Q8TCE9 139 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 APH1BQ8WW43 257 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TOE1Q96GM8 510 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 NRIP3Q9NQ35 241 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 NIT2Q9NQR4 276 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 NXT1Q9UKK6 140 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 NCBP2LA6PVI3 153 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 P2RY10O00398 339 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 DEGS1O15121 323 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 GABRB3P28472 473 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 EIF2DP41214 584 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CXCL12P48061 93 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CARD18P57730 90 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TRA2BP62995 288 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 LFNGQ8NES3 379 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 MOKQ9UQ07 419 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms