RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GALNT16Q8N428 558 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 NAXEQ8NCW5 288 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 NRIP3Q9NQ35 241 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 V9GY05 133 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 A0A087X0M5 115 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 A0A1B0GX30 115 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 TMEM72A0PK05 275 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 FITM1A5D6W6 292 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 ZNF208O43345 1280 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 STC2O76061 302 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 ACKR3P25106 362 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 S100A2P29034 98 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 POU3F4P49335 361 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 FOXK2Q01167 660 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 DUSP2Q05923 314 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 RSU1Q15404 277 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 NR0B2Q15466 257 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 ALKBH2Q6NS38 261 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 ASPGQ86U10 573 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 UBAC2Q8NBM4 344 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 KISS1RQ969F8 398 aaPredicted RBP13.19□□□□□ -0.3
CDT1-201ENST00000301019 BRF2Q9HAW0 419 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 ADGRL4Q9HBW9 690 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 KIF26AQ9ULI4 1882 aaPredicted RBP13.19□□□□□ -0.3
CDT1-201ENST00000301019 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
CDT1-201ENST00000301019 IFNA2P01563 188 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 PI3P19957 117 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 FXYD6P3P58550 94 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 SIRPAP78324 504 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 SHC2P98077 582 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 TGM3Q08188 693 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 MEF2DQ14814 521 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 AWAT1Q58HT5 328 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 OR2A2Q6IF42 318 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 DHRS11Q6UWP2 260 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 GJD3Q8N144 294 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 TSSK2Q96PF2 358 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 RAB33BQ9H082 229 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 SEBOXQ9HB31 216 aaPredicted RBP13.19□□□□□ -0.3
CDT1-201ENST00000301019 STEAP1Q9UHE8 339 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 TAC3Q9UHF0 121 aa13.19□□□□□ -0.3
CDT1-201ENST00000301019 A0A0D9SG52 128 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 ASGR2P07307 311 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 DPP4P27487 766 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 DCDP81605 110 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 LTBQ06643 244 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 DHRS2Q13268 280 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 SLC35F3Q8IY50 421 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 OR51A4Q8NGJ6 313 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 TM4SF18Q96CE8 201 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 RAB3CQ96E17 227 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 CD180Q99467 661 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 GPR62Q9BZJ7 368 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 MYNNQ9NPC7 610 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 LHX9Q9NQ69 397 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 ADAM18Q9Y3Q7 739 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 CSAG2Q9Y5P2 127 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 TRBV5-4A0A0C4DH59 114 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 RNASEK-C17orf49H0YIS7 233 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 GSTZ1O43708 216 aaPredicted RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 C1GALT1C1LP0DN25 315 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 EDN3P14138 238 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 GATMP50440 423 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 PPP2CBP62714 309 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 PPP2CAP67775 309 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 TRAM1Q15629 374 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 ALG11Q2TAA5 492 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 OR4N5Q8IXE1 308 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 KCNRGQ8N5I3 272 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 OR4C6Q8NH72 309 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 Q96M85 177 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 GSKIPQ9P0R6 139 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 RCC2Q9P258 522 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 OR8G3PP0DMU2 310 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 NANOS3P60323 173 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 RPS11P62280 158 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDT1-201ENST00000301019 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 SLC22A6Q4U2R8 563 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 ZNF561Q8N587 486 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 OR5AP2Q8NGF4 316 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 TMEM41AQ96HV5 264 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
CDT1-201ENST00000301019 SEMA6CQ9H3T2 930 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms