RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 FGF13Q92913 245 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 RASD2Q96D21 266 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 A0A1B0GWA3 101 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 TMEM72A0PK05 275 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 OR2F2O95006 317 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 AMY2AP04746 511 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 HSD17B2P37059 387 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
TVP23A-201ENST00000299866 CAPZA1P52907 286 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 OR2F1Q13607 317 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ZIC1Q15915 447 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 NKAIN2Q5VXU1 208 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 ARRDC3Q96B67 414 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
TVP23A-201ENST00000299866 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
TVP23A-201ENST00000299866 MEX3AA1L020 520 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 OR2T1O43869 369 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 VEGFDO43915 354 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CTAG2O75638 210 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CXCL14O95715 111 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 RAB3DO95716 219 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 PMS2P2O95744 297 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 IFNA4P05014 189 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 TMPRSS9Q7Z410 1059 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CACUL1Q86Y37 369 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 MRPL48Q96GC5 212 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 LMF1Q96S06 567 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 GSN-AS1Q9NRJ2 163 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 DHCR7Q9UBM7 475 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 IKZF2Q9UKS7 526 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 THBS1P07996 1170 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 SPI1P17947 270 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 LIPNQ5VXI9 398 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ENPP7Q6UWV6 458 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 FAM122BQ7Z309 247 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 GABRG1Q8N1C3 465 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 OR51A4Q8NGJ6 313 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 FBXO17Q96EF6 278 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ADAD1Q96M93 576 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ZMAT3Q9HA38 289 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CHRNA9Q9UGM1 479 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 FAM96BQ9Y3D0 163 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 EFEMP2O95967 443 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 AGR2O95994 175 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 CCR2P41597 374 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 RPS27P42677 84 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 POU3F4P49335 361 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 GAS6Q14393 721 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 TCEA2Q15560 299 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ARHGAP40Q5TG30 622 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ZAR1Q86SH2 424 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 BIVMQ86UB2 503 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 RAB42Q8N4Z0 105 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 SLC22A8Q8TCC7 542 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
TVP23A-201ENST00000299866 PITHD1Q9GZP4 211 aaPredicted RBP11.88□□□□□ -0.51
TVP23A-201ENST00000299866 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 RAD1O60671 282 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 DNAJB6O75190 326 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 NDUFB2O95178 105 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 SNAPINO95295 136 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CASRP41180 1078 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 NR0B1P51843 470 aaKnown RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 PNLIPRP2P54317 469 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 NR0B2Q15466 257 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ALG10BQ5I7T1 473 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 METRNLQ641Q3 311 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 FAM220AQ7Z4H9 259 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 GALNT16Q8N428 558 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF676Q8N7Q3 588 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 MYADMQ96S97 322 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 SFXN1Q9H9B4 322 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CXorf51AA0A1B0GTR3 108 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CCL16O15467 120 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 HLA-AP01891 365 aaKnown RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ITGB2P05107 769 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms