RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RSPH9Q9H1X1 276 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-201ENST00000297423 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 KNTC1P50748 2209 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 A0A1W2PR48 441 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 ABCD4O14678 606 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 OIP5O43482 229 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 CYB5AP00167 134 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 HPP00738 406 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 ASGR2P07307 311 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 NME2P22392 152 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 CPT2P23786 658 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 CDK5R1Q15078 307 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-201ENST00000297423 DECR1Q16698 335 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 PDZD11Q5EBL8 140 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 DCUN1D3Q8IWE4 304 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 PPP1R1CQ8WVI7 109 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 ZBTB8AQ96BR9 441 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 SLC19A3Q9BZV2 496 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 TLNRD1Q9H1K6 362 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 UPB1Q9UBR1 384 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 OR52A4PA6NMU1 304 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 LINC01565O15544 149 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 CTNSO60931 367 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 AKAIN1P0CW23 69 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SLC6A6P31641 620 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 C21orf58P58505 322 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ACTC1P68032 377 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ACTA1P68133 377 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF585AQ6P3V2 769 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 FAM180AQ6UWF9 173 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 NUS1Q96E22 293 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SLC35A4Q96G79 324 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SYT4Q9H2B2 425 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SLC25A32Q9H2D1 315 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 CHMP1AQ9HD42 196 aaPredicted RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM218A2RU14 115 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ZGLP1P0C6A0 271 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 HIST1H1CP16403 213 aaKnown RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 IGFBP4P22692 258 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 RAG2P55895 527 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 PLA2G7Q13093 441 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 PLEKHN1Q494U1 663 aaPredicted RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 STEAP1BQ6NZ63 245 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 C3orf33Q6P1S2 294 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 JAZF1Q86VZ6 243 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 OR1J4Q8NGS1 313 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 OR1J2Q8NGS2 313 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 NXPE3Q969Y0 559 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 FAM46BQ96A09 425 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM106AQ96A25 262 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 RASD2Q96D21 266 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 JAM3Q9BX67 310 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SMIM3Q9BZL3 60 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 NPDC1Q9NQX5 325 aaPredicted RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 DHCR7Q9UBM7 475 aaKnown RBP13.61□□□□□ -0.23
SPIDR-201ENST00000297423 IGLV3-16A0A075B6K0 115 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 OR6C76A6NM76 312 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 WASH3PC4AMC7 463 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SERPINA5P05154 406 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 PSMA3P25788 255 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 GABRA3P34903 492 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ATP1B3P54709 279 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 FABP9Q0Z7S8 132 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 UBXN2BQ14CS0 331 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 NKAPLQ5M9Q1 402 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 CD300LDQ6UXZ3 194 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 PLPP7Q8NBV4 271 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 OR5AK2Q8NH90 309 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 SMIM19Q96E16 107 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 PIGMQ9H3S5 423 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 MED17Q9NVC6 651 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 ACAD8Q9UKU7 415 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 CABIN1Q9Y6J0 2220 aa13.61□□□□□ -0.23
SPIDR-201ENST00000297423 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 PRRT4C9JH25 899 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 GALR3O60755 368 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 CXADRP78310 365 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 EIF2S3LQ2VIR3 472 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 FAM111BQ6SJ93 734 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF836Q6ZNA1 936 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM200AQ86VY9 491 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 SPICQ8N5J4 248 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF485Q8NCK3 441 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 OR10G6Q8NH81 332 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ADGRL4Q9HBW9 690 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ZFP57Q9NU63 452 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 FBXO34Q9NWN3 711 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 OBP2AQ9NY56 170 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 NPC1O15118 1278 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 OR6A2O95222 327 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 KAT7O95251 611 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 CISD3P0C7P0 127 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms