RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 VSTM5A8MXK1 200 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF99A8MXY4 864 aaPredicted RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HNRNPCL2B2RXH8 293 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HNRNPCL3B7ZW38 293 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HNRNPCL1O60812 293 aaKnown RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 NCR1O76036 304 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 PATE4P0C8F1 98 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HNRNPCL4P0DMR1 293 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 NR4A1P22736 598 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HTR2AP28223 471 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ARR3P36575 388 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 DVL1P1P54792 670 aaPredicted RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 SH3BGRP55822 239 aaPredicted RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 TXNL4AP83876 142 aaKnown RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ALKBH6Q3KRA9 238 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 GLIPR1L2Q4G1C9 344 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 NXNQ6DKJ4 435 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 NHLRC1Q6VVB1 395 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 DEF8Q6ZN54 512 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 C20orf196Q8IYI0 205 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 SEMA6DQ8NFY4 1073 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 OR9I1Q8NGQ6 314 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 FGFBP3Q8TAT2 258 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 MRPL24Q96A35 216 aaKnown RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF317Q96PQ6 595 aaPredicted RBP7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ZBTB18Q99592 522 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 WFDC6Q9BQY6 131 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 TMEM109Q9BVC6 243 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 KCNK9Q9NPC2 374 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 HIF1ANQ9NWT6 349 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 MED29Q9NX70 200 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 ZNF224Q9NZL3 707 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 RCE1Q9Y256 329 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
CNOT9-202ENST00000295701 A0A096LPI6 279 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 A0A1B0GWA3 101 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 LRRN3E7EW58 273 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 AIM2O14862 343 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 RGS16O15492 202 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 SYNGR3O43761 229 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 TPST1O60507 370 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 FZD7O75084 574 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 SLC22A3O75751 556 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ANP32DO95626 131 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ERCC1P07992 297 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 NAT2P11245 290 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF35P13682 527 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 B4GALT1P15291 398 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF14P17017 642 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 EGR1P18146 543 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 PAX7P23759 505 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 GTF2E2P29084 291 aaKnown RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 GPR6P46095 362 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 LMO4P61968 165 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 CAMK2DQ13557 499 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 SLC9B1Q4ZJI4 515 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF813Q6ZN06 617 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 H1FNTQ75WM6 255 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 GLCCI1Q86VQ1 547 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 C10orf111Q8N326 155 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ANKRD42Q8N9B4 389 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 PIK3C3Q8NEB9 887 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 FBLIM1Q8WUP2 373 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 KRTAP4-12Q9BQ66 201 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 RACGAP1Q9H0H5 632 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 CENPHQ9H3R5 247 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF275Q9NSD4 429 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 CALML5Q9NZT1 146 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 RPS6KB2Q9UBS0 482 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 USP22Q9UPT9 525 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 IFT52Q9Y366 437 aa7.96□□□□□ -1.14
CNOT9-202ENST00000295701 V9GYY5 206 aaPredicted RBP7.96□□□□□ -1.14
CNOT9-202ENST00000295701 B4DSR2 109 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 M0R233 179 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 TM9SF1O15321 606 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 KCNAB3O43448 404 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 SPRY1O43609 319 aaPredicted RBP7.95□□□□□ -1.14
CNOT9-202ENST00000295701 ZNF500O60304 480 aaPredicted RBP7.95□□□□□ -1.14
CNOT9-202ENST00000295701 TPST2O60704 377 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 CLPTM1O96005 669 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 BGLAPP02818 100 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 F13BP05160 661 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 IL6P05231 212 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 ZCCHC18P0CG32 403 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 GAAP10253 952 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 SAGP10523 405 aaPredicted RBP7.95□□□□□ -1.14
CNOT9-202ENST00000295701 GLRXP35754 106 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 MAGEB1P43366 347 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 PTDSS1P48651 473 aaKnown RBP7.95□□□□□ -1.14
CNOT9-202ENST00000295701 RAB39AQ14964 217 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 MFSD13AQ14CX5 517 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 RGNQ15493 299 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 FXNQ16595 210 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 GSG1Q2KHT4 349 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 PDCD4Q53EL6 469 aaKnown RBP7.95□□□□□ -1.14
CNOT9-202ENST00000295701 FAM69AQ5T7M9 428 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 CDPF1Q6NVV7 123 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 SLC2A7Q6PXP3 512 aa7.95□□□□□ -1.14
CNOT9-202ENST00000295701 C6orf89Q6UWU4 347 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms