RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TP53I11O14683 189 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 AKR7A2O43488 359 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC22A5O76082 557 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 EPHA1P21709 976 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 IL32P24001 234 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GDNFP39905 211 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CSRP3P50461 194 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FCN2Q15485 313 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 STK11Q15831 433 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF620Q6ZNG0 422 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 COMMD7Q86VX2 200 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KIF18BQ86Y91 864 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 MS4A15Q8N5U1 240 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FGGYQ96C11 551 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 WWTR1Q9GZV5 400 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF442Q9H7R0 627 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KCNG2Q9UJ96 466 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NUP50Q9UKX7 468 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 COPS3Q9UNS2 423 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TMED7Q9Y3B3 224 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ASB4Q9Y574 426 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC22A7Q9Y694 548 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CACNA1DQ01668 2161 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 hCG_1807616A0A1W2PRN6 198 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 NPC1O15118 1278 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SIGLEC6O43699 453 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 KCNJ13O60928 360 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CTNSO60931 367 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 RAB3DO95716 219 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 IL1AP01583 271 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 IFNGR1P15260 489 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SRMP19623 302 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GDF1P27539 372 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CDAP32320 146 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PRSS3P35030 304 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZFP36L2P47974 494 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 AFF3P51826 1226 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 RSU1Q15404 277 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 MEX3BQ6ZN04 569 aaKnown RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 DCXRQ7Z4W1 244 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PPP1R3BQ86XI6 285 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 PLPP6Q8IY26 295 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 OR4C3Q8NH37 302 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 BAHD1Q8TBE0 780 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC25A46Q96AG3 418 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 BMFQ96LC9 184 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF700Q9H0M5 742 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SIRT3Q9NTG7 399 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 UBQLN2Q9UHD9 624 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SLC22A13Q9Y226 551 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF281Q9Y2X9 895 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ESPL1Q14674 2120 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 EPOPA6NHQ4 379 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 WISP3O95389 354 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 PAPLNO95428 1278 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PMP2P02689 132 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 RPA2P15927 270 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CSNK2A1P68400 391 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 LTC4SQ16873 150 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 COL28A1Q2UY09 1125 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ARHGAP11BQ3KRB8 267 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 C14orf28Q4W4Y0 310 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GLYATL3Q5SZD4 288 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 PYHIN1Q6K0P9 492 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 UNQ6126/PRO20091Q6UXV3 157 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZAR1Q86SH2 424 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF595Q8IYB9 648 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GPR137CQ8N3F9 429 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CSNK2A3Q8NEV1 391 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ELP5Q8TE02 316 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 MAFIPQ8WZ33 124 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 LCORQ96JN0 433 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 SFXN2Q96NB2 322 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 LSM5Q9Y4Y9 91 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 FNDC1Q4ZHG4 1894 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 MEX3AA1L020 520 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 A6NLC8 198 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 HOXB5P09067 269 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GNRHRP30968 328 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 CAPZA1P52907 286 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 HSD11B2P80365 405 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SF3A2Q15428 464 aaKnown RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 TRAM1Q15629 374 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 C3orf38Q5JPI3 329 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 KCTD20Q7Z5Y7 419 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF100Q8IYN0 542 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF417Q8TAU3 575 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 ZNF587Q96SQ5 575 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 C1QTNF6Q9BXI9 259 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC5A7Q9GZV3 580 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC52A3Q9NQ40 469 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 SLC39A1Q9NY26 324 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 TMEM14AQ9Y6G1 99 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 IMPA2O14732 288 aa4.38□□□□□ -1.71
UBR1-201ENST00000290650 GALR3O60755 368 aaPredicted RBP4.38□□□□□ -1.71
UBR1-201ENST00000290650 B3GALNT1O75752 331 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms