RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ALKBH4Q9NXW9 302 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 TESQ9UGI8 421 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MGAMO43451 1857 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 CACNA1DQ01668 2161 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 FFAR1O14842 300 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MAKP20794 623 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 CHATP28329 748 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 CTHP32929 405 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 OR10A3P58181 314 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 UBE2MP61081 183 aaKnown RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 LTBQ06643 244 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 BPHLQ86WA6 291 aaPredicted RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 GLB1L2Q8IW92 636 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MCEMP1Q8IX19 187 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 ABHD4Q8TB40 342 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 DVL3Q92997 716 aaPredicted RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 MEPEQ9NQ76 525 aaPredicted RBP11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 SDHAF3Q9NRP4 125 aa11.57□□□□□ -0.56
SLC6A1-201ENST00000287766 CSF3P09919 207 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 DPTQ07507 201 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 GRM7Q14831 915 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF322Q6U7Q0 402 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 TMUB2Q71RG4 321 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 LSMEM1Q8N8F7 131 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 AVL9Q8NBF6 648 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 OR4D11Q8NGI4 311 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF417Q8TAU3 575 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 KCTD12Q96CX2 325 aaKnown RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 HDAC8Q9BY41 377 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 C19orf12Q9NSK7 152 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 LUZP4Q9P127 313 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PPP4R1LQ9P1A2 415 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC23A1Q9UHI7 598 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 BHLHE40O14503 412 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ELK1P19419 428 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 OR1D4P47884 311 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 LBX1P52954 281 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 NSDHLQ15738 373 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 AANATQ16613 207 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 HEPHL1Q6MZM0 1159 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 TPRA1Q86W33 373 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 WDR77Q9BQA1 342 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PITHD1Q9GZP4 211 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SERINC1Q9NRX5 453 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 KLRF1Q9NZS2 232 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF629Q9UEG4 869 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM230AA0A1W2PPH8 454 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 EFCAB7A8K855 629 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 HTR1FP30939 366 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SGCAQ16586 387 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM74A1Q5RGS3 127 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 HACD4Q5VWC8 232 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 MCATQ8IVS2 390 aaKnown RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 LRRC56Q8IYG6 542 aaPredicted RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SDF2Q99470 211 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PRRT1Q99946 306 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF442Q9H7R0 627 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PDE7BQ9NP56 450 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ASXL3Q9C0F0 2248 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SCN10AQ9Y5Y9 1956 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 C17orf105B2RV13 164 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SERPINA5P05154 406 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 FPR3P25089 353 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 RPS27P42677 84 aaKnown RBP11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 CLDN6P56747 220 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PPP2CBP62714 309 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PPP2CAP67775 309 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 HSD11B2P80365 405 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PLCXD2Q0VAA5 305 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC6A19Q695T7 634 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 OR6F1Q8NGZ6 308 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 C20orf85Q9H1P6 137 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC6A20Q9NP91 592 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 PRODH2Q9UF12 536 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 ADAM18Q9Y3Q7 739 aa11.56□□□□□ -0.56
SLC6A1-201ENST00000287766 MEGF11A6BM72 1044 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 FGF17O60258 216 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 CNOT4O95628 575 aaKnown RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 AK1P00568 194 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 EGFP01133 1207 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SEC61A1P61619 476 aaKnown RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 ZBTB37Q5TC79 503 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 C3orf33Q6P1S2 294 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 CAMKMTQ7Z624 323 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 OR4C15Q8NGM1 316 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SCN2AQ99250 2005 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 RGS11O94810 467 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 PIPP12273 146 aaPredicted RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 GABRB1P18505 474 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 OMGP23515 440 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 KIR2DL3P43628 341 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR85P60893 370 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 BTG1P62324 171 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 UBE2IP63279 158 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms