RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RFPL3SP0C7P2 107 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 CCNA2P20248 432 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 NOS3P29474 1203 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 ITGADQ13349 1161 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 ARMC4Q5T2S8 1044 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 NIPAL3Q6P499 406 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PLBD1Q6P4A8 553 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 XKRXQ6PP77 449 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 FADS6Q8N9I5 356 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PTP4A1Q93096 173 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PTDSS2Q9BVG9 487 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 ANGPTL4Q9BY76 406 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 RACGAP1Q9H0H5 632 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 ERGIC3Q9Y282 383 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 OR14I1A6ND48 311 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PRR23D1E9PI22 279 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 TRIM3O75382 744 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PRR23D2P0DMB1 279 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 RPL4P36578 427 aaKnown RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 RPS5P46782 204 aaKnown RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 TIGD6Q17RP2 521 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 MEPCEQ7L2J0 689 aaKnown RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 ERI1Q8IV48 349 aaKnown RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 NANOGP1Q8N7R0 232 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 PROKR2Q8NFJ6 384 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 BBS1Q8NFJ9 593 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 OR2M3Q8NG83 312 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 MRGPRX4Q96LA9 322 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 NDEL1Q9GZM8 345 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 TP63Q9H3D4 680 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-201ENST00000270061 QPCTLQ9NXS2 382 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 IER3IP1Q9Y5U9 82 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 MPDZO75970 2070 aa22.04■■□□□ 1.12
SSBP4-201ENST00000270061 A0A1B0GVC2 190 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 FAM183AA6NL82 134 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 IMPA2O14732 288 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 HIST1H2ABP04908 130 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 FAM69AQ5T7M9 428 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 C1orf140Q5VVS0 124 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 POMZP3Q6PJE2 187 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 SLC16A12Q6ZSM3 486 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 HIST3H2AQ7L7L0 130 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 SLC37A3Q8NCC5 494 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 MOSPD2Q8NHP6 518 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 HIST1H2ACQ93077 130 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 DMRTA2Q96SC8 542 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 EXO5Q9H790 373 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 TAS2R16Q9NYV7 291 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 LSM2Q9Y333 95 aaKnown RBP22.03■■□□□ 1.12
SSBP4-201ENST00000270061 HRH3Q9Y5N1 445 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 ADGRG4Q8IZF6 3080 aa22.03■■□□□ 1.12
SSBP4-201ENST00000270061 ZC3H12DA2A288 527 aaKnown RBP22.02■■□□□ 1.12
SSBP4-201ENST00000270061 AQP7O14520 342 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 ZNF208O43345 1280 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 OR2T1O43869 369 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 CD14P08571 375 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 AQP2P41181 271 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 ZNF41P51814 821 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-201ENST00000270061 ARSKQ6UWY0 536 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 NCCRP1Q6ZVX7 275 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-201ENST00000270061 WDSUB1Q8N9V3 476 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 MND1Q9BWT6 205 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 JAM3Q9BX67 310 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 EXOSC1Q9Y3B2 195 aaKnown RBP22.02■■□□□ 1.12
SSBP4-201ENST00000270061 PKDREJQ9NTG1 2253 aa22.02■■□□□ 1.12
SSBP4-201ENST00000270061 TRGV5A0A0B4J1U4 118 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 PRSS44E7EML9 344 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 BLOC1S5-TXNDC5H3BN57 136 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 GABARAPO95166 117 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 AGAP20933 346 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 PAICSP22234 425 aaKnown RBP22.02■■□□□ 1.11
SSBP4-201ENST00000270061 GDF1P27539 372 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 SH3BGRP55822 239 aaPredicted RBP22.02■■□□□ 1.11
SSBP4-201ENST00000270061 CRMP1Q14194 572 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 PLPPR5Q32ZL2 321 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 GXYLT1Q4G148 440 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 ALG10Q5BKT4 473 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 NANOGNBQ7Z5D8 188 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 ACKR4Q9NPB9 350 aa22.02■■□□□ 1.11
SSBP4-201ENST00000270061 SLC22A31A6NKX4 558 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 TXNDC12O95881 172 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 HIST1H1CP16403 213 aaKnown RBP22.01■■□□□ 1.11
SSBP4-201ENST00000270061 SLC2A5P22732 501 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 PCSK6P29122 969 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 TGFBR2P37173 567 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 EMC4Q5J8M3 183 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 IGFN1Q86VF2 1251 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 OR5M11Q96RB7 305 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 DDOQ99489 341 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 KATNB1Q9BVA0 655 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 HCAR1Q9BXC0 346 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 CLEC2DQ9UHP7 191 aa22.01■■□□□ 1.11
SSBP4-201ENST00000270061 KLF2Q9Y5W3 355 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-201ENST00000270061 ARHGAP21Q5T5U3 1957 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 ATE1O95260 518 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 AHSA1O95433 338 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 MYL12AP19105 171 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 LIPAP38571 399 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 FAM122BQ7Z309 247 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 P2RY8Q86VZ1 359 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms