RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NECTIN4Q96NY8 510 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ELOVL3Q9HB03 270 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SCPEP1Q9HB40 452 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 NCBP2LA6PVI3 153 aaKnown RBP11.26□□□□□ -0.61
SRRM4-201ENST00000267260 TRIM77I1YAP6 450 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 K7ERQ8 282 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 LGALS8O00214 317 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 IDUAP35475 653 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 TSACCQ96A04 125 aaPredicted RBP11.26□□□□□ -0.61
SRRM4-201ENST00000267260 GPR174Q9BXC1 333 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ALOXE3Q9BYJ1 711 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 A0A1W2PQU0 124 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 CCKARP32238 428 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 RAD1O60671 282 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ALX3O95076 343 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 GDNFP39905 211 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 MBTPS1Q14703 1052 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 CLDN22Q8N7P3 220 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 CABLES2Q9BTV7 478 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 FAM171A2A8MVW0 826 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 DCTN6O00399 190 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF728P0DKX0 622 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 C3orf38Q5JPI3 329 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 PRICKLE2Q7Z3G6 844 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 RASD2Q96D21 266 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SUCNR1Q9BXA5 334 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SLC17A9Q9BYT1 436 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 KCNG2Q9UJ96 466 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SMCHD1A6NHR9 2005 aa11.26□□□□□ -0.61
SRRM4-201ENST00000267260 SCG5P05408 212 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 HLA-FP30511 346 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 SQSTM1Q13501 440 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CYB561A3Q8NBI2 242 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 VN1R3Q9BXE9 311 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 C12orf10Q9HB07 376 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 NDRG3Q9UGV2 375 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 LAMTOR5O43504 91 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 DUSP1P28562 367 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PSMB10P40306 273 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF154Q13106 437 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PGGHGQ32M88 737 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PLK5Q496M5 336 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PDZD3Q86UT5 571 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF321PQ8N8H1 164 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 TSLPQ969D9 159 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 APIPQ96GX9 242 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 NKX6-3A6NJ46 265 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PHF1O43189 567 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 SLC16A7O60669 478 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 TNFRSF1BP20333 461 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 KRTDAPP60985 99 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 SLC22A24Q8N4F4 322 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 OR51B6Q9H340 312 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 STRAPQ9Y3F4 350 aaKnown RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 TACR1P25103 407 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 NTSR1P30989 418 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PPP2CAP67775 309 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 IKZF1Q13422 519 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 LAX1Q8IWV1 398 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CNEP1R1Q8N9A8 125 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 IFI44Q8TCB0 444 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PIGQQ9BRB3 760 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 CEP290O15078 2479 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PIRO00625 290 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 SOCS6O14544 535 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 HTR2CP28335 458 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 RPS19P39019 145 aaKnown RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 DDOSTP39656 456 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 OR2B8PP59922 312 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 ZNF765Q7L2R6 523 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 KIRREL1Q96J84 757 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 DHRS9Q9BPW9 319 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 GNB4Q9HAV0 340 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 AJAP1Q9UKB5 411 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 TMEM184BQ9Y519 407 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 LOC100289279A0A1B0GTE1 492 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 H3BQ06 376 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-201ENST00000267260 AQP9O43315 295 aa11.25□□□□□ -0.61
SRRM4-201ENST00000267260 PDE7AQ13946 482 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms