RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 VRK3Q8IV63 474 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 C19orf47Q8N9M1 422 aaKnown RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 CALHM2Q9HA72 323 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 MOKQ9UQ07 419 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 CYB5BO43169 146 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 GALR3O60755 368 aaPredicted RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 GLSO94925 669 aaPredicted RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 UTS2O95399 124 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 HTR1FP30939 366 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 ALKBH1Q13686 389 aaKnown RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 LYSMD2Q8IV50 215 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 PFN4Q8NHR9 129 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 BLACEA4D250 179 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 HMGN3Q15651 99 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 OR10R2Q8NGX6 335 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 INTS12Q96CB8 462 aaKnown RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 UBXN10Q96LJ8 280 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 ATP6V1G2-DDX39BF2Z307 99 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 UBL3O95164 117 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 ELK1P19419 428 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 CSNK1DP48730 415 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 FXNQ16595 210 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 TRIM61Q5EBN2 209 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 UBE2FQ969M7 185 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 OR52A5Q9H2C5 316 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 NXT1Q9UKK6 140 aaKnown RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 NOSIPQ9Y314 301 aaKnown RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 MYO10Q9HD67 2058 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 PAPLNO95428 1278 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 LIPAP38571 399 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 IL34Q6ZMJ4 242 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 NAA40Q86UY6 237 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TEX51A0A1B0GUA7 166 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 ZFP92A6NM28 416 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 CR2P20023 1033 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 GLYR1Q49A26 553 aaPredicted RBP16.62■□□□□ 0.25
COL5A3-201ENST00000264828 SOWAHCQ53LP3 525 aaPredicted RBP16.62■□□□□ 0.25
COL5A3-201ENST00000264828 AAED1Q7RTV5 226 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 PPP1R3BQ86XI6 285 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 GRAMD2AQ8IUY3 354 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 EVA1AQ9H8M9 152 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 GAB2Q9UQC2 676 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 WIF1Q9Y5W5 379 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TMED7-TICAM2A0A0A6YYA0 188 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 DDAH2O95865 285 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 HBE1P02100 147 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 AADACP22760 399 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 HBG1P69891 147 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 HBG2P69892 147 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 FAM199XQ6PEV8 388 aaPredicted RBP16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TMUB2Q71RG4 321 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 CLDN22Q8N7P3 220 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 FGF13Q92913 245 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 RAB39BQ96DA2 213 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 EMC7Q9NPA0 242 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TMED7Q9Y3B3 224 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 ITGB4P16144 1822 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 S100A11P31949 105 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 SNCAP37840 140 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 GLYATL3Q5SZD4 288 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TMEM200AQ86VY9 491 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 HRASLS5Q96KN8 279 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 ARNT2Q9HBZ2 717 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TMEM189-UBE2V1I3L0A0 370 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 ICMTO60725 284 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 TRIM23P36406 574 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 SOHLH1Q5JUK2 328 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 OR1S2Q8NGQ3 325 aa16.62■□□□□ 0.25
COL5A3-201ENST00000264828 H3BNC9 293 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 SCRG1O75711 98 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
COL5A3-201ENST00000264828 SF3B4Q15427 424 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL5A3-201ENST00000264828 IAH1Q2TAA2 248 aaPredicted RBP16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ADPRMQ3LIE5 342 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 PDZD11Q5EBL8 140 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 MED25Q71SY5 747 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 MDGA2Q7Z553 956 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ZNF595Q8IYB9 648 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ZNF511Q8NB15 262 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 OR14A16Q8NHC5 309 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 RNF170Q96K19 258 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 BOKQ9UMX3 212 aaPredicted RBP16.61■□□□□ 0.25
COL5A3-201ENST00000264828 KLK4Q9Y5K2 254 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 YIPF5Q969M3 257 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 PLK3Q9H4B4 646 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 RNF167Q9H6Y7 350 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ADAM12O43184 909 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 NAGAP17050 411 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 DCAF7P61962 342 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 PMPCAQ10713 525 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ADAM29Q9UKF5 820 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 ZC3H12DA2A288 527 aaKnown RBP16.61■□□□□ 0.25
COL5A3-201ENST00000264828 LRIT2A6NDA9 550 aa16.61■□□□□ 0.25
COL5A3-201ENST00000264828 AQP7O14520 342 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms