RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 HLA-DQB1P01920 261 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CD1AP06126 327 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 YES1P07947 543 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CSF3P09919 207 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CLEC2LP0C7M8 214 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MSL3P1P0C860 447 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PEPDP12955 493 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 AZGP1P25311 298 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 GALNSP34059 522 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PTGER1P34995 402 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HTR3AP46098 478 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MRPS15P82914 257 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PITPNAQ00169 270 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HSF2Q03933 536 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 LTBQ06643 244 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MRPL28Q13084 256 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PRICKLE4Q2TBC4 344 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 KLHL12Q53G59 568 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 TRMT12Q53H54 448 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SLC35D3Q5M8T2 416 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HBMQ6B0K9 141 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PLBD1Q6P4A8 553 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ULK3Q6PHR2 472 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CNIH2Q6PI25 160 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 RPTNQ6XPR3 784 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MEX3BQ6ZN04 569 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 C8orf86Q6ZUL3 223 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 LRRC28Q86X40 367 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 KLBQ86Z14 1044 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 TGIF2LYQ8IUE0 185 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 OR4N5Q8IXE1 308 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 D2HGDHQ8N465 521 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ARIH2OSQ8N7S6 290 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 BCORP1Q8N888 145 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 POMGNT2Q8NAT1 580 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SYT14Q8NB59 555 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ZNF485Q8NCK3 441 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 OR10H4Q8NGA5 316 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 OR5W2Q8NH69 310 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 OR1L3Q8NH93 324 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 FLVCR1-AS1Q8TAF5 88 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CAPSLQ8WWF8 208 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 TRIM63Q969Q1 353 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ZG16BQ96DA0 208 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SGTBQ96EQ0 304 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 RBM18Q96H35 190 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ZNF486Q96H40 463 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 DGAT2Q96PD7 388 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 TM9SF2Q99805 663 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ATF6BQ99941 703 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SMR3AQ99954 134 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PRSS27Q9BQR3 290 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 TTYH2Q9BSA4 534 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 LMF2Q9BU23 707 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HDHD5Q9BXW7 423 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MIXL1Q9H2W2 232 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 RERGLQ9H628 205 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 FOLH1BQ9HBA9 442 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 NEK6Q9HC98 313 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HINT3Q9NQE9 182 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 INIPQ9NRY2 104 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 RBFOX1Q9NWB1 397 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 ING3Q9NXR8 418 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SEMA5BQ9P283 1151 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PRODH2Q9UF12 536 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 EPHA6Q9UF33 1036 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MRTO4Q9UKD2 239 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 SLC6A5Q9Y345 797 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 PTRH2Q9Y3E5 179 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 CHST2Q9Y4C5 530 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 MPDZO75970 2070 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 GTF3C1Q12789 2109 aa6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 HRNRQ86YZ3 2850 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-201ENST00000264640 LOC105369274A0A096LPK9 316 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 TRAV1-2A0A0B4J238 106 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 A0A0B4J2E0 115 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 LOC102723532A0A0G2JNH3 316 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 A0A1B0GX12 115 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 A0A1W2PS29 197 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 GXYLT2A0PJZ3 443 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 ANKRD61A6NGH8 418 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 ZNF860A6NHJ4 632 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 J3QRE1 110 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 SGK494L7N484 410 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 CYR61O00622 381 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 PDCD5O14737 125 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 RGS13O14921 159 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 LYRM1O43325 122 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 PLPP2O43688 288 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 GPRIN2O60269 458 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 CTNSO60931 367 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 LDB3O75112 727 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 PTP4A3O75365 173 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 SLC43A1O75387 559 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 ITGA10O75578 1167 aa6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 GATBO75879 557 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-201ENST00000264640 ARL6IP5O75915 188 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms