RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 FER1L6-AS2Q96M78 137 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SNX18Q96RF0 628 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 APOC3P02656 99 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ENPP1P22413 925 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 CAV2P51636 162 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 YIF1BQ5BJH7 314 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 LACC1Q8IV20 430 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 OR6F1Q8NGZ6 308 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 MFFQ9GZY8 342 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 NELFAQ9H3P2 528 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 CDCP1Q9H5V8 836 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 NIPAL2Q9H841 368 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 GTPBP8Q8N3Z3 284 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 RSPRY1Q96DX4 576 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 MVB12AQ96EY5 273 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ARL5BQ96KC2 179 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 ADAM23O75077 832 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 UBL3O95164 117 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 OR8U9P0C7N5 309 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 GDNFP39905 211 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 CYB561P49447 251 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 MTCP1P56278 107 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 DEFB123Q8N688 67 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ZBTB8AQ96BR9 441 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 PLCXD1Q9NUJ7 323 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 OSGIN1Q9UJX0 560 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 M0R082 166 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 P2RY10O00398 339 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 P2RX6O15547 441 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 IFNA2P01563 188 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 GABREP78334 506 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 FAM53BQ14153 422 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 IFI44Q8TCB0 444 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ZNF419Q96HQ0 510 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 POMT2Q9UKY4 750 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 DLEC1Q9Y238 1755 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 RFPL3O75679 317 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 AKR7A3O95154 331 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 SPDEFO95238 335 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ETV5P41161 510 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 VEGFCP49767 419 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 ETV1P50549 477 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 HAGHLQ6PII5 290 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 SULF2Q8IWU5 870 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 KIAA1958Q8N8K9 716 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 FNDC9Q8TBE3 224 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 OR2M2Q96R28 347 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 CSF3RQ99062 836 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 TMEM59Q9BXS4 323 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 METTL9Q9H1A3 318 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
CDH3-201ENST00000264012 RBFOX1Q9NWB1 397 aaKnown RBP12.85□□□□□ -0.35
CDH3-201ENST00000264012 TRAPPC2LH3BP13 241 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 FUCA1P04066 466 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 FCGR2AP12318 317 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 CASP3P42574 277 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 MEX3BQ6ZN04 569 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 OR56B4Q8NH76 319 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 TXNDC15Q96J42 360 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 PDCD1LG2Q9BQ51 273 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 A0A0A6YYD5 115 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 PLSCR5A0PG75 271 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 METTL12A8MUP2 240 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 GLB1P16278 677 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 DLSTP36957 453 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 LCN10Q6JVE6 187 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 OR7C1O76099 320 aaPredicted RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 CD160O95971 181 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 APOBEC1P41238 236 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 GP2P55259 537 aaKnown RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 TP53I13Q8NBR0 393 aaPredicted RBP12.84□□□□□ -0.35
CDH3-201ENST00000264012 OR5D18Q8NGL1 313 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 SEMA4CQ9C0C4 833 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 SLC6A13Q9NSD5 602 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 EHFQ9NZC4 300 aa12.84□□□□□ -0.35
CDH3-201ENST00000264012 COA3Q9Y2R0 106 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms