RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CDC14CA4D256 554 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 THY1P04216 161 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 ZNF823P16415 610 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 CCKBRP32239 447 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 SOX2P48431 317 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 FAM76BQ5HYJ3 339 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 FAM209BQ5JX69 171 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 SLC6A19Q695T7 634 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 TIGD3Q6B0B8 471 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 GPR139Q6DWJ6 353 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 DGAT2L6Q6ZPD8 337 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 TMEM17Q86X19 198 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 CTHRC1Q96CG8 243 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 RASD2Q96D21 266 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 MVB12AQ96EY5 273 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 OR1F2PQ96R84 312 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 GSX2Q9BZM3 304 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 PCED1AQ9H1Q7 454 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 OR51J1Q9H342 316 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 MEPEQ9NQ76 525 aaPredicted RBP14.89□□□□□ -0.03
CTCF-201ENST00000264010 ABRACLQ9P1F3 81 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 KCNE5Q9UJ90 142 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 AK6Q9Y3D8 172 aaKnown RBP14.89□□□□□ -0.03
CTCF-201ENST00000264010 PTPRSQ13332 1948 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 IGHV5-51A0A0C4DH38 117 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 TFP02787 698 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 ZGLP1P0C6A0 271 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 DIO1P49895 249 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 MAP2K6P52564 334 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.89□□□□□ -0.03
CTCF-201ENST00000264010 HAVCR2Q8TDQ0 301 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 Q96M85 177 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 ATF6BQ99941 703 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 THAP7Q9BT49 309 aaPredicted RBP14.89□□□□□ -0.03
CTCF-201ENST00000264010 RSPO3Q9BXY4 272 aaPredicted RBP14.89□□□□□ -0.03
CTCF-201ENST00000264010 ASF1BQ9NVP2 202 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 CKLFQ9UBR5 152 aa14.89□□□□□ -0.03
CTCF-201ENST00000264010 PSMD9O00233 223 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 KLF4O43474 513 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 FOXS1O43638 330 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 LALBAP00709 142 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 F13BP05160 661 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 H2AFB2P0C5Z0 115 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 MGAT2Q10469 447 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 RPTNQ6XPR3 784 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 DPPA2Q7Z7J5 298 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 NLGN4YQ8NFZ3 816 aaPredicted RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 OR10H5Q8NGA6 315 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 C3orf49Q96BT1 292 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 ZNF436Q9C0F3 470 aaPredicted RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 RNF32Q9H0A6 362 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 SDHAF2Q9NX18 166 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 SRPK3Q9UPE1 567 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 MOKQ9UQ07 419 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 FKBP7Q9Y680 259 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 MBTPS2O43462 519 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 PRKNO60260 465 aaPredicted RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 RLN2P04090 185 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 GIFP27352 417 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 AFF3P51826 1226 aaKnown RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 CD300LFQ8TDQ1 290 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 PTP4A1Q93096 173 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 KLHL15Q96M94 604 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 S100A13Q99584 98 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 NXF5Q9H1B4 397 aaKnown RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 NCDNQ9UBB6 729 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 NPFFR2Q9Y5X5 522 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 V9GYH0 126 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 ARHGEF17Q96PE2 2063 aaPredicted RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 LOC105371267A0A1B0GV96 52 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 HRKO00198 91 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 CXCL12P48061 93 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 S100A12P80511 92 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 SRSF5Q13243 272 aaKnown RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 SYS1Q8N2H4 156 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 CADM4Q8NFZ8 388 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 SMAP2Q8WU79 429 aaPredicted RBP14.88□□□□□ -0.03
CTCF-201ENST00000264010 RNF31Q96EP0 1072 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 FOXQ1Q9C009 403 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 FBXL2Q9UKC9 423 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 C5orf42Q9H799 3197 aa14.88□□□□□ -0.03
CTCF-201ENST00000264010 SOX1O00570 391 aaPredicted RBP14.87□□□□□ -0.03
CTCF-201ENST00000264010 GLCEO94923 617 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 RBMS1P29558 406 aaKnown RBP14.87□□□□□ -0.03
CTCF-201ENST00000264010 GUCA1AP43080 201 aaPredicted RBP14.87□□□□□ -0.03
CTCF-201ENST00000264010 HYAL4Q2M3T9 481 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 PRSS42Q7Z5A4 293 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 SLC35F3Q8IY50 421 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 THRSPQ92748 146 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 TSLPQ969D9 159 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 S100A16Q96FQ6 103 aaKnown RBP14.87□□□□□ -0.03
CTCF-201ENST00000264010 HCAR1Q9BXC0 346 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 UCK1Q9HA47 277 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 PLEKHA6Q9Y2H5 1048 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 CDC40O60508 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
CTCF-201ENST00000264010 ZNF254O75437 659 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 SCGNO76038 276 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 EPHA4P54764 986 aa14.87□□□□□ -0.03
CTCF-201ENST00000264010 EXOSC2Q13868 293 aaKnown RBP14.87□□□□□ -0.03
CTCF-201ENST00000264010 DNM1P34Q6PK57 102 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms