RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 STX18Q9P2W9 335 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 ZNF346Q9UL40 294 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 ADAM18Q9Y3Q7 739 aa14.71□□□□□ -0.05
CHCHD3-201ENST00000262570 LRRK2Q5S007 2527 aa14.71□□□□□ -0.06
CHCHD3-201ENST00000262570 SPTBN1Q01082 2364 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 COL12A1Q99715 3063 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 ZNF726A6NNF4 738 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 EEF1E1-BLOC1S5C9J1V9 151 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 EEF1E1O43324 174 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 IGFBP1P08833 259 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC6A6P31641 620 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 DAP3P51398 398 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 RPL27P61353 136 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 ERVK-25P63136 954 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 ARMC4Q5T2S8 1044 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 OR8D4Q8NGM9 314 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 ASB10Q8WXI3 467 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC25A44Q96H78 314 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 TSPAN32Q96QS1 320 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 POLDIP3Q9BY77 421 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 SLCO5A1Q9H2Y9 848 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 PRSS50Q9UI38 385 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 ADGRG4Q8IZF6 3080 aa14.7□□□□□ -0.06
CHCHD3-201ENST00000262570 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 FAM90A27PA6NNH2 459 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 SOX14O95416 240 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 CNOT4O95628 575 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 OSMP13725 252 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 APEHP13798 732 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 CAMK2DQ13557 499 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 FBXL19-AS1Q494R0 122 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC36A3Q495N2 470 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 TSPO2Q5TGU0 170 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 FBXW9Q5XUX1 488 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 BEND4Q6ZU67 534 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 PARP8Q8N3A8 854 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 LRR1Q96L50 414 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 KCNJ16Q9NPI9 418 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 PAPOLBQ9NRJ5 636 aaKnown RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 MALT1Q9UDY8 824 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 TMEFF2Q9UIK5 374 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 FOXD3Q9UJU5 478 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 POFUT2Q9Y2G5 429 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 FREM1Q5H8C1 2179 aa14.69□□□□□ -0.06
CHCHD3-201ENST00000262570 NKX2-6A6NCS4 301 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 OR6C65A6NJZ3 312 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ARPC3O15145 178 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 MGRN1O60291 552 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC43A1O75387 559 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 TXNDC12O95881 172 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 IGHV3-9P01782 118 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ASCL1P50553 236 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 RUNX1T1Q06455 604 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 TOP3AQ13472 1001 aaPredicted RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 CLEC12AQ5QGZ9 265 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 Q6ZT83 130 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 HDDC2Q7Z4H3 204 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ARIH2OSQ8N7S6 290 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 POMGNT2Q8NAT1 580 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 OR52L1Q8NGH7 329 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ZNF519Q8TB69 540 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 RBM4BQ9BQ04 359 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 C9orf16Q9BUW7 83 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 IFT27Q9BW83 186 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 RBM4Q9BWF3 364 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 MRPL13Q9BYD1 178 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 LINC00470Q9BZP3 86 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC7A10Q9NS82 523 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 KRT84Q9NSB2 600 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 GRHPRQ9UBQ7 328 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 IER3IP1Q9Y5U9 82 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 CENPBD1B2RD01 187 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 H3BN98 237 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 BHLHE40O14503 412 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 EI24O14681 340 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 MITFO75030 526 aaPredicted RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 UPK3AO75631 287 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 PPP1R3DO95685 299 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ALPLP05186 524 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 PGA4P0DJD7 388 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 PGA3P0DJD8 388 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 SDHAP31040 664 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ACVR1BP36896 505 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 RPS6KA3P51812 740 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 TFF3Q07654 80 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 CARD17Q5XLA6 110 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 FAM205BPQ63HN1 556 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 GPR139Q6DWJ6 353 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 C20orf196Q8IYI0 205 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 GABRG1Q8N1C3 465 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 UBE2J2Q8N2K1 259 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 CBR4Q8N4T8 237 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ZNF566Q969W8 418 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 EME1Q96AY2 570 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 Q96M85 177 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 ERMAPQ96PL5 475 aaPredicted RBP14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 SLC29A1Q99808 456 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 TSSK6Q9BXA6 273 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 TBC1D23Q9NUY8 699 aa14.68□□□□□ -0.06
CHCHD3-201ENST00000262570 USE1Q9NZ43 259 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms