RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ABHD6Q9BV23 337 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 ZMAT3Q9HA38 289 aaKnown RBP13.23□□□□□ -0.29
CUX2-201ENST00000261726 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
CUX2-201ENST00000261726 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 PRELID3BQ9Y3B1 194 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 ZNF587BE7ETH6 402 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 M0QZQ0 153 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SLC35A1P78382 337 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
CUX2-201ENST00000261726 WDR5BQ86VZ2 330 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 MFSD9Q8NBP5 474 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 OR8U1Q8NH10 309 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SMAP2Q8WU79 429 aaPredicted RBP13.23□□□□□ -0.29
CUX2-201ENST00000261726 FCRL1Q96LA6 429 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SORT1Q99523 831 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 MKRN2Q9H000 416 aaKnown RBP13.23□□□□□ -0.29
CUX2-201ENST00000261726 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SLC1A3P43003 542 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 RAB38P57729 211 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 GPLD1P80108 840 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 SLC5A12Q1EHB4 618 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 ADPRMQ3LIE5 342 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 EMG1Q92979 244 aaKnown RBP13.23□□□□□ -0.29
CUX2-201ENST00000261726 NMNAT3Q96T66 252 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 GDE1Q9NZC3 331 aa13.23□□□□□ -0.29
CUX2-201ENST00000261726 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 AQP9O43315 295 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 NUDT1P36639 197 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 CSNK1EP49674 416 aaKnown RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 DEFB103AP81534 67 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 LAX1Q8IWV1 398 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 OR5AS1Q8N127 324 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 URGCP-MRPS24S4R325 110 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 UTS2O95399 124 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 C1SP09871 688 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 NDUFB7P17568 137 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 DCDP81605 110 aaKnown RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 TNFRSF17Q02223 184 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 FGGYQ96C11 551 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 DCLRE1CQ96SD1 692 aaKnown RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 GPR45Q9Y5Y3 372 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 PRKRAO75569 313 aaKnown RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 YIF1AO95070 293 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 IMPA1P29218 277 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 OBP2AQ9NY56 170 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 ZNF814B7Z6K7 855 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 IGHV3-9P01782 118 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 OR13C7P0DN81 318 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 PRLHRP49683 370 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 PSMB3P49720 205 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 WNT7BP56706 349 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 ZNF91Q05481 1191 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 FRMPD2BQ6IN97 320 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 GDPD3Q7L5L3 318 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 METTL4Q8N3J2 472 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 AGBL5Q8NDL9 886 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 NRG4Q8WWG1 115 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 CLSTN3Q9BQT9 956 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 NRIP3Q9NQ35 241 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 TMED7-TICAM2A0A0A6YYA0 188 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 THBS1P07996 1170 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 LAP3P28838 519 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 OPCMLQ14982 345 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 ZNF595Q8IYB9 648 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 PIGLQ9Y2B2 252 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 TMED7Q9Y3B3 224 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 SPINT2O43291 252 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 SHC1P29353 583 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 SLC5A2P31639 672 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 GLYR1Q49A26 553 aaPredicted RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 FAM111BQ6SJ93 734 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
CUX2-201ENST00000261726 DHCR7Q9UBM7 475 aaKnown RBP13.22□□□□□ -0.29
CUX2-201ENST00000261726 NRAPQ86VF7 1730 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 A0A1W2PPH5 198 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 LRP5LA4QPB2 252 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 LRRC30A6NM36 301 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 EDN1P05305 212 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 HEXAP06865 529 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 P2RX3P56373 397 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 MLF1P58340 268 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 RAC1P63000 192 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 SIX1Q15475 284 aaPredicted RBP13.21□□□□□ -0.29
CUX2-201ENST00000261726 HSD17B11Q8NBQ5 300 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 HLA-HP01893 362 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 FRMD1Q8N878 549 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 OR52H1Q8NGJ2 320 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 OR5K2Q8NHB8 316 aa13.21□□□□□ -0.29
CUX2-201ENST00000261726 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms