RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 THOC3Q96J01 351 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TEX37Q96LM6 180 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 PSORS1C1Q9UIG5 152 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 LINC01553A4QN01 128 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF814B7Z6K7 855 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 NFYBP25208 207 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CCR6P51684 374 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 F2RL1P55085 397 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SLC48A1Q6P1K1 146 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SPRED1Q7Z699 444 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 STT3BQ8TCJ2 826 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TOX2Q96NM4 488 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 C6orf106Q9H6K1 298 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CYB5BO43169 146 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TXNL1O43396 289 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TRIM23P36406 574 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 DLX5P56178 289 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 HSD17B7P56937 341 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ALKBH1Q13686 389 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CLINT1Q14677 625 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SLC10A1Q14973 349 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 RBMS2Q15434 407 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 PLK5Q496M5 336 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ATPAF1Q5TC12 328 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CPEB2Q7Z5Q1 589 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 NTNG1Q9Y2I2 539 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CITO14578 2027 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 PHF1O43189 567 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SCG5P05408 212 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 OR2T7P0C7T2 308 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TPMTP51580 245 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CATR1Q13166 79 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 MEP1BQ16820 701 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM52BQ4KMG9 183 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 HIST2H3PS2Q5TEC6 136 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 NRARPQ7Z6K4 114 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 MISPQ8IVT2 679 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 OR6V1Q8N148 313 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 LILRA2Q8N149 483 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SIRT6Q8N6T7 355 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 OR2T27Q8NH04 317 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TPPP3Q9BW30 176 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CLEC2DQ9UHP7 191 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 TJP1Q07157 1748 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 EFSO43281 561 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 ALOX12BO75342 701 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NSA2O95478 260 aaKnown RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF728P0DKX0 622 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SRP9P49458 86 aaKnown RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SSTP61278 116 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 RNF4P78317 190 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 HES1Q14469 280 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 KCNJ8Q15842 424 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 HACD4Q5VWC8 232 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NXNL2Q5VZ03 156 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 L3MBTL4Q8NA19 623 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 OR6T1Q8NGN1 323 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 FAM213BQ8TBF2 198 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 UPRTQ96BW1 309 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 PRAMEF25A6NGN4 478 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 HS3ST1O14792 307 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NFYAP23511 347 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 PHLDA2Q53GA4 152 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SPPL3Q8TCT6 385 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 CCDC74AQ96AQ1 378 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 OR2M2Q96R28 347 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 LUZP4Q9P127 313 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 COA3Q9Y2R0 106 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 NRAPQ86VF7 1730 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SERPINF1P36955 418 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 Q499Y3 187 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 GOT1L1Q8NHS2 421 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-201ENST00000261037 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SLC46A1Q96NT5 459 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 LTBP4Q8N2S1 1624 aa11.15□□□□□ -0.62
COL8A1-201ENST00000261037 TLCD2A6NGC4 264 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 TOR1AO14656 332 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 SLC35E2P0CK97 266 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 MTHFD2P13995 350 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 NPPBP16860 134 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 RRADP55042 308 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 GPLD1P80108 840 aa11.15□□□□□ -0.63
COL8A1-201ENST00000261037 AARDQ4LEZ3 155 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms