RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RUSC1-AS1Q66K80 236 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 TUBA3EQ6PEY2 450 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 LRRC69Q6ZNQ3 347 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 TCF23Q7RTU1 214 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 GPALPP1Q8IXQ4 340 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 KBTBD8Q8NFY9 601 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 OR5M3Q8NGP4 307 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 FOXN4Q96NZ1 517 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 OR1F2PQ96R84 312 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 EXO5Q9H790 373 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 EQTNQ9NQ60 294 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ZCCHC3Q9NUD5 404 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CLN6Q9NWW5 311 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CKLFQ9UBR5 152 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 SAMD4AQ9UPU9 718 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF835Q9Y2P0 537 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 IGKV1-12A0A0C4DH73 117 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 DCDC2BA2VCK2 349 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ENO4A6NNW6 628 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 MYL12BO14950 172 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 KRT33AO76009 404 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CYB5AP00167 134 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 IGKV1D-12P01611 117 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CELA3BP08861 270 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 NRG3P56975 720 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 FAAH2Q6GMR7 532 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF774Q6NX45 483 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 GPR141Q7Z602 305 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 LRRTM1Q86UE6 522 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 GALNT12Q8IXK2 581 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 OR4K5Q8NGD3 323 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 SFXN5Q8TD22 340 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 MMABQ96EY8 250 aaPredicted RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CNDP2Q96KP4 475 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 THUMPD3Q9BV44 507 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 CDCA4Q9BXL8 241 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 ACTRT3Q9BYD9 372 aa4.95□□□□□ -1.62
TOPBP1-201ENST00000260810 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 IGKV1D-8A0A087WSZ0 117 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PDCD5O14737 125 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ADAMDEC1O15204 470 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 NDUFB5O43674 189 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OR10H2O60403 315 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SERPINA3P01011 423 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MT-ND2P03891 347 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DBTP11182 482 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CRATP43155 626 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 KHKP50053 298 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CBX3Q13185 183 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DAG1Q14118 895 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PDK3Q15120 406 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF621Q6ZSS3 439 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC9A6Q92581 669 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MCHR2Q969V1 340 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 IER2Q9BTL4 223 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CLEC4MQ9H2X3 399 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 LOC100130705A0A1B0GUX0 176 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 IGF2P01344 180 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ERCC1P07992 297 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ITGA5P08648 1049 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 EFNB2P52799 333 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF91Q05481 1191 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 REEP3Q6NUK4 255 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PHC2Q8IXK0 858 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CARFQ8N187 725 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 NUBPLQ8TB37 319 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 S100ZQ8WXG8 99 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 FIG4Q92562 907 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 COL21A1Q96P44 957 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MS4A4EQ96PG1 132 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 KCNJ15Q99712 375 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OR51E2Q9H255 320 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PTGFRNQ9P2B2 879 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PCDHGA5Q9Y5G8 931 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ABCA1O95477 2261 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OR6C70A6NIJ9 312 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 C17orf105B2RV13 164 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PLA2G10O15496 165 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 RPS19P39019 145 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CENPAP49450 140 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 OR10A3P58181 314 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 NCS1P62166 190 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 EIF5AP63241 154 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 FADDQ13158 208 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 DGUOKQ16854 277 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MST1LQ2TV78 715 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 PLEKHN1Q494U1 663 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 RNLSQ5VYX0 342 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MBOAT2Q6ZWT7 520 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 MRPL41Q8IXM3 137 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ZFP62Q8NB50 900 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 C19orf18Q8NEA5 215 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 ENKURQ8TC29 256 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 CHAC2Q8WUX2 184 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC7A6Q92536 515 aa4.94□□□□□ -1.62
TOPBP1-201ENST00000260810 RORBQ92753 470 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms