RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 DMRTA2Q96SC8 542 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 ADI1Q9BV57 179 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 GLRX2Q9NS18 164 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 EMC3Q9P0I2 261 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 GRHPRQ9UBQ7 328 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 BAIAP2Q9UQB8 552 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 MEMO1Q9Y316 297 aa14.03□□□□□ -0.16
CCDC90B-201ENST00000260054 LOC100130705A0A1B0GUX0 176 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC35F4A4IF30 521 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 E9PLN8 166 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 HIST1H1CP16403 213 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 EDNRAP25101 427 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 NOS3P29474 1203 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 CEACAM8P31997 349 aaPredicted RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 SELENOPP49908 381 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 PER3P56645 1201 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 PMPCAQ10713 525 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 EIF2S3LQ2VIR3 472 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF362Q5T0B9 420 aaPredicted RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 C12orf73Q69YU5 71 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 GPR139Q6DWJ6 353 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 CCDC71Q8IV32 467 aaPredicted RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 DHRSXQ8N5I4 330 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 ARIH2OSQ8N7S6 290 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 CYGBQ8WWM9 190 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 TMEM45BQ96B21 275 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 PITX2Q99697 317 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 VKORC1Q9BQB6 163 aa14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 NDRG4Q9ULP0 352 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 NOSIPQ9Y314 301 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-201ENST00000260054 PHF3Q92576 2039 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 M0R129 80 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 IMPA2O14732 288 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC16A6O15403 523 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 IDH3BO43837 385 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF432O94892 652 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC2A10O95528 541 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 IL2RAP01589 272 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 GRK5P34947 590 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 GGT2P36268 569 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ACVR1BP36896 505 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 KIR2DL2P43627 348 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 SIRPAP78324 504 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ADARB1P78563 741 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 KRR1Q13601 381 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TMEM201Q5SNT2 666 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 C6orf52Q5T4I8 152 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 NIPAL3Q6P499 406 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 FAM214BQ7L5A3 538 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 AAED1Q7RTV5 226 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 OR4K13Q8NH42 304 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 OR6X1Q8NH79 312 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TFAP2CQ92754 450 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 OR2M2Q96R28 347 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 RCE1Q9Y256 329 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ESPL1Q14674 2120 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 SURF4O15260 269 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TNFSF13O75888 250 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CLIC3O95833 236 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TMIGD3P0DMS9 266 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CDKN2AP42771 156 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CAMK2DQ13557 499 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 RIPPLY2Q5TAB7 128 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CARD17Q5XLA6 110 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CASP12Q6UXS9 341 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 TMEM123Q8N131 208 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 OR52E2Q8NGJ4 325 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 HDAC2Q92769 488 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 SLC25A44Q96H78 314 aaPredicted RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ADAD1Q96M93 576 aaKnown RBP14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 ZFP3Q96NJ6 502 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 CMC2Q9NRP2 79 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 GMPPBQ9Y5P6 360 aa14.01□□□□□ -0.17
CCDC90B-201ENST00000260054 A0A0G2JNJ9 132 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 ZNF726A6NNF4 738 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 H7C1C5 153 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 CCL21O00585 134 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 ARHGEF9O43307 516 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 MRPL33O75394 65 aaKnown RBP14□□□□□ -0.17
CCDC90B-201ENST00000260054 TRMUO75648 421 aaKnown RBP14□□□□□ -0.17
CCDC90B-201ENST00000260054 HMGN1P05114 100 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 ACADSP16219 412 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 PAX7P23759 505 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 CALRP27797 417 aaKnown RBP14□□□□□ -0.17
CCDC90B-201ENST00000260054 CAPGP40121 348 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 LCN6P62502 163 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 KEAP1Q14145 624 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 TTC23Q5W5X9 447 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 FAM205BPQ63HN1 556 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 VWA1Q6PCB0 445 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 ATCAYQ86WG3 371 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 CNEP1R1Q8N9A8 125 aa14□□□□□ -0.17
CCDC90B-201ENST00000260054 SDR9C7Q8NEX9 313 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms