RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 GRHPRQ9UBQ7 328 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 TMEM184BQ9Y519 407 aaPredicted RBP13.85□□□□□ -0.19
DDX56-201ENST00000258772 ETV7Q9Y603 341 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 A0A0C4DFX4 3053 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 SZT2Q5T011 3432 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 ACOT7O00154 380 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 ENPP1P22413 925 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 MST1P26927 711 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 DCTDP32321 178 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 MNDAP41218 407 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 RPL18Q07020 188 aaKnown RBP13.85□□□□□ -0.19
DDX56-201ENST00000258772 POU4F3Q15319 338 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 LINC00303Q3SY05 128 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 SLC25A25Q6KCM7 469 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 FAAP20Q6NZ36 180 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 GLDNQ6ZMI3 551 aaPredicted RBP13.85□□□□□ -0.19
DDX56-201ENST00000258772 DNAAF1Q8NEP3 725 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 SUN5Q8TC36 379 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 CCDC74AQ96AQ1 378 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 SEC22CQ9BRL7 303 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 THADAQ6YHU6 1953 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 H7C1C5 153 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 LDOC1O95751 146 aaPredicted RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 EPHA4P54764 986 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 TAS2R20P59543 309 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 LCN6P62502 163 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 GRM7Q14831 915 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 COL13A1Q5TAT6 717 aaPredicted RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 FTMTQ8N4E7 242 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 KTI12Q96EK9 354 aaPredicted RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 TCTN2Q96GX1 697 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 RBP7Q96R05 134 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 IKZF2Q9UKS7 526 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 SEC16AO15027 2179 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 RPS10-NUDT3A0A1W2PQS6 291 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 OR4C45A6NMZ5 311 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 C17orf105B2RV13 164 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 SCDO00767 359 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 ZNF264O43296 627 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 MAS1P04201 325 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 TMIGD3P0DMS9 266 aaPredicted RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 CPN1P15169 458 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 IFNGR1P15260 489 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 MAZP56270 477 aaKnown RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 GRK1Q15835 563 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 MESTQ5EB52 335 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 EMC4Q5J8M3 183 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 CLLU1Q5K131 121 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 TMPRSS12Q86WS5 348 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 SPICQ8N5J4 248 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 OR2G2Q8NGZ5 317 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 CHIAQ9BZP6 476 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 CDCP1Q9H5V8 836 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 EXOSC3Q9NQT5 275 aaKnown RBP13.84□□□□□ -0.19
DDX56-201ENST00000258772 TAS2R5Q9NYW4 299 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 GMEB2Q9UKD1 530 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 PCDHGA5Q9Y5G8 931 aa13.84□□□□□ -0.19
DDX56-201ENST00000258772 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 AKR7A3O95154 331 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 IL33O95760 270 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 CFDP00746 253 aaPredicted RBP13.83□□□□□ -0.2
DDX56-201ENST00000258772 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 ALOX5APP20292 161 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 GALNSP34059 522 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 RPS27P42677 84 aaKnown RBP13.83□□□□□ -0.2
DDX56-201ENST00000258772 CBFBQ13951 182 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 SERTAD2Q14140 314 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 LRRN1Q6UXK5 716 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 DNM1P46Q6ZS02 220 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 DPY19L4Q7Z388 723 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 ZNF321PQ8N8H1 164 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 UXS1Q8NBZ7 420 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 OR6N2Q8NGY6 317 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 UTP23Q9BRU9 249 aaKnown RBP13.83□□□□□ -0.2
DDX56-201ENST00000258772 WDR76Q9H967 626 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 PIPOXQ9P0Z9 390 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 MGAT4CQ9UBM8 478 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 MMP17Q9ULZ9 603 aa13.83□□□□□ -0.2
DDX56-201ENST00000258772 TRBV5-7A0A0A0MS05 114 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 ANXA2P2A6NMY6 339 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 TPPPO94811 219 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 ZNF432O94892 652 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 GLSO94925 669 aaPredicted RBP13.82□□□□□ -0.2
DDX56-201ENST00000258772 UTS2O95399 124 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 PDGFAP04085 211 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 ANXA2P07355 339 aaKnown RBP13.82□□□□□ -0.2
DDX56-201ENST00000258772 ITPKBP27987 946 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 TACR3P29371 465 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 CCR5P51681 352 aa13.82□□□□□ -0.2
DDX56-201ENST00000258772 TSPAN5P62079 268 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms