RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CBX3Q13185 183 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SRSF6Q13247 344 aaKnown RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 GDPGP1Q6ZNW5 385 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SMPDL3BQ92485 455 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SGCZQ96LD1 299 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 NMNAT2Q9BZQ4 307 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 ISG20L2Q9H9L3 353 aaKnown RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 INIPQ9NRY2 104 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 CNTRLQ7Z7A1 2325 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 A0A1W2PNR3 127 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 TXNDC12O95881 172 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 P04436 131 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 DPP4P27487 766 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 PYCR1P32322 319 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 RORCP51449 518 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 GPR85P60893 370 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 CDC20Q12834 499 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 VASH2Q86V25 355 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 ACBD7Q8N6N7 88 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 OR6K6Q8NGW6 343 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 MFSD8Q8NHS3 518 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SPRYD4Q8WW59 207 aaPredicted RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 ADAMTS14Q8WXS8 1223 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 TM9SF2Q99805 663 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 TTTY10Q9BZA0 68 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SERINC1Q9NRX5 453 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 MRPL39Q9NYK5 338 aaKnown RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ARHGEF9O43307 516 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 SSX4O60224 188 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 CEACAM1P13688 526 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 SFTPDP35247 375 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 NAA10P41227 235 aaPredicted RBP16.99■□□□□ 0.31
TRIM47-201ENST00000254816 CYB561P49447 251 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 MYBPHQ13203 477 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ACKR1Q16570 336 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ZMAT1Q5H9K5 638 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ARMC4Q5T2S8 1044 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 KLHL36Q8N4N3 616 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 RFLNBQ8N5W9 214 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 SYT14Q8NB59 555 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF485Q8NCK3 441 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 NDEL1Q9GZM8 345 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 SRA1Q9HD15 236 aaKnown RBP16.99■□□□□ 0.31
TRIM47-201ENST00000254816 DAPL1A0PJW8 107 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 MS4A18H0YCH9 400 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 DCTN6O00399 190 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 AKR7A3O95154 331 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 MELKQ14680 651 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 MS4A18Q3C1V0 323 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 TIGD3Q6B0B8 471 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 SPINK14Q6IE38 97 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 C3orf33Q6P1S2 294 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ZBTB8BQ8NAP8 495 aaPredicted RBP16.99■□□□□ 0.31
TRIM47-201ENST00000254816 TIMP4Q99727 224 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ARHGAP9Q9BRR9 750 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 ALG8Q9BVK2 526 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 HAO2Q9NYQ3 351 aa16.99■□□□□ 0.31
TRIM47-201ENST00000254816 LIPT2A6NK58 231 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 TFP02787 698 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 AZGP1P25311 298 aaKnown RBP16.98■□□□□ 0.31
TRIM47-201ENST00000254816 ACVR1BP36896 505 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 HNRNPA0Q13151 305 aaKnown RBP16.98■□□□□ 0.31
TRIM47-201ENST00000254816 PON3Q15166 354 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 OR8H2Q8N162 312 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 OR5B2Q96R09 309 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 JAM3Q9BX67 310 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 DEPPQ9NTK1 212 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 DKKL1Q9UK85 242 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 SELENOFO60613 162 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 CD82P27701 267 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 TOMM20Q15388 145 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 EMC4Q5J8M3 183 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 SSX6Q7RTT6 188 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 PM20D2Q8IYS1 436 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 EXD3Q8N9H8 876 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 KIAA1143Q96AT1 154 aaPredicted RBP16.98■□□□□ 0.31
TRIM47-201ENST00000254816 ZBTB8AQ96BR9 441 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 TMEM41AQ96HV5 264 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 POTEKPQ9BYX7 375 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 DLL3Q9NYJ7 618 aa16.98■□□□□ 0.31
TRIM47-201ENST00000254816 ZFHX4Q86UP3 3567 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 A0A1W2PQL4 384 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 ZIC3O60481 467 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 TRIM3O75382 744 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 SNX4O95219 450 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 PTTG1O95997 202 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 SDC2P34741 201 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 CD96P40200 585 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 DIO1P49895 249 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 DSCR4P56555 118 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 RPL27P61353 136 aaKnown RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF85Q03923 595 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 TLE3Q04726 772 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 RUNX1T1Q06455 604 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 LGALS3BPQ08380 585 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 PUDPQ08623 228 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 TMEM176BQ3YBM2 270 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 CRTC2Q53ET0 693 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms