RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CD83Q01151 205 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 CCDC58Q4VC31 144 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 OR5M10Q6IEU7 315 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 HIST3H2AQ7L7L0 130 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC16A9Q7RTY1 509 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 PM20D2Q8IYS1 436 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 HIST1H2ACQ93077 130 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 TAS2R5Q9NYW4 299 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 MRM2Q9UI43 246 aaKnown RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 MRPS7Q9Y2R9 242 aaKnown RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC6A5Q9Y345 797 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF318Q5VUA4 2279 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 TO15178 435 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 CDC40O60508 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 AKR7A3O95154 331 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 TIAF1O95411 115 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 TXNDC12O95881 172 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 SQSTM1Q13501 440 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF441Q8N8Z8 693 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 IFI44Q8TCB0 444 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 THAP3Q8WTV1 239 aaPredicted RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 ADAD1Q96M93 576 aaKnown RBP16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 FKRPQ9H9S5 495 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 ANKRD10Q9NXR5 420 aa16.93■□□□□ 0.3
PDLIM4-201ENST00000253754 ALPK2Q86TB3 2170 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 HTR3EA5X5Y0 456 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 C2orf72A6NCS6 295 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 ARHGEF9O43307 516 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 EVI2BP34910 448 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 MTFR2Q6P444 385 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 IZUMO1Q8IYV9 350 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 PTDSS2Q9BVG9 487 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
PDLIM4-201ENST00000253754 ANKRD61A6NGH8 418 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 H3BSH0 61 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 TOX3O15405 576 aaPredicted RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF354AO60765 605 aaPredicted RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 UPK3AO75631 287 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 GATBO75879 557 aaKnown RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ADRB1P08588 477 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 CD3GP09693 182 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 SRMP19623 302 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 CLDN20P56880 219 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 HSF2Q03933 536 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 HES5Q5TA89 166 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 LIPNQ5VXI9 398 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 KRT74Q7RTS7 529 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 YIPF7Q8N8F6 280 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 LGALS14Q8TCE9 139 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 STT3BQ8TCJ2 826 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ZFP3Q96NJ6 502 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC7A5P2Q9GIP4 190 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 OR11A1Q9GZK7 315 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 MOV10Q9HCE1 1003 aaKnown RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF281Q9Y2X9 895 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 BOLA1Q9Y3E2 137 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 IGHV5-10-1A0A0J9YXX1 117 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF879B4DU55 563 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 GSTT2P0CG29 244 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 GSTT2BP0CG30 244 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 TRAPPC2P0DI81 140 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 TRAPPC2BP0DI82 140 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 GP1BBP13224 206 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 PRKCAP17252 672 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 SDHBP21912 280 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 AHCYP23526 432 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 UNQ9370/PRO34162Q6UXP9 181 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 DPY19L4Q7Z388 723 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 CDC20BQ86Y33 519 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF433Q8N7K0 673 aaPredicted RBP16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 RPS4Y2Q8TD47 263 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 DUSP19Q8WTR2 217 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 MAP6Q96JE9 813 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 NPAS1Q99742 590 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ABCG5Q9H222 651 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 MOKQ9UQ07 419 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 ADAMTS20P59510 1910 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 RALGAPA1Q6GYQ0 2036 aa16.91■□□□□ 0.3
PDLIM4-201ENST00000253754 TRAV36DV7A0A075B6V5 113 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 A0A1W2PQD3 144 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 SUSD5O60279 629 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 FADS1O60427 444 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 CD1AP06126 327 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 PGCP20142 388 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 DGCR2P98153 550 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 OVCH1Q7RTY7 1134 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 BMPERQ8N8U9 685 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ZNF671Q8TAW3 534 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 MRPL48Q96GC5 212 aaKnown RBP16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 AMELYQ99218 206 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ZCCHC4Q9H5U6 513 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 FRRS1LQ9P0K9 344 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ZFHX2Q9C0A1 2572 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms