RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CTHRC1Q96CG8 243 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 JAM3Q9BX67 310 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 SPEF1Q9Y4P9 236 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 PTPRSQ13332 1948 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 TRIOO75962 3097 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 ABCA7Q8IZY2 2146 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 ARPC5O15511 151 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 PTH2RP49190 550 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 PER3P56645 1201 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 NSDHLQ15738 373 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 TCTE1Q5JU00 501 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 CDCA3Q99618 268 aaPredicted RBP11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 LPAR4Q99677 370 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 ATG5Q9H1Y0 275 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 ELOVL3Q9HB03 270 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 UBQLN2Q9UHD9 624 aa11.49□□□□□ -0.57
RAB3IP-201ENST00000247833 A0A1B0GVI7 797 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 DCDC2BA2VCK2 349 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 SLC16A7O60669 478 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 ECDO95905 644 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 RAF1P04049 648 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 FAUP35544 74 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 LINC00303Q3SY05 128 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 TEX261Q6UWH6 196 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 BAIAP2L2Q6UXY1 529 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 MARCH3Q86UD3 253 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 LSMEM1Q8N8F7 131 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 OR51A4Q8NGJ6 313 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 GPBAR1Q8TDU6 330 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 INTS14Q96SY0 518 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 DPYSL5Q9BPU6 564 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 SERTAD3Q9UJW9 196 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 U3KQ87 197 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 NUP210Q8TEM1 1887 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 FOXS1O43638 330 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 PNMTP11086 282 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 CD1CP29017 333 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 PLCXD2Q0VAA5 305 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 FZD2Q14332 565 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 GRK1Q15835 563 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 MANEAQ5SRI9 462 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 COQ8AQ8NI60 647 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 KLHL15Q96M94 604 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 OR5V1Q9UGF6 321 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 SCP2D1Q9UJQ7 156 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 FARSAQ9Y285 508 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 SPTY2D1-AS1A0A0U1RR47 76 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 LIPCP11150 499 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 FOXL2P58012 376 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 EXOSC2Q13868 293 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 MEP1BQ16820 701 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 METTL11BQ5VVY1 283 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 TSTD1Q8NFU3 115 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 GPR148Q8TDV2 347 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 MRPL38Q96DV4 380 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 B3GNT4Q9C0J1 378 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 EXO5Q9H790 373 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 SLC22A13Q9Y226 551 aa11.48□□□□□ -0.57
RAB3IP-201ENST00000247833 USP34Q70CQ2 3546 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 PRR32B1ATL7 298 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 ACOT7O00154 380 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 S1PR1P21453 382 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 UBE2IP63279 158 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 MRPS21P82921 87 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 GUCA2AQ02747 115 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 MELKQ14680 651 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 SCGB2B2Q4G0G5 96 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 ESCO2Q56NI9 601 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 LMF2Q9BU23 707 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 LRRC61Q9BV99 259 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 C2orf16Q68DN1 1984 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 FANCMQ8IYD8 2048 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 GABARAPH6UMI1 98 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 SRPX2O60687 465 aaPredicted RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 AKR7A3O95154 331 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 GP1BBP13224 206 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 RORAP35398 523 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 TAS2R20P59543 309 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 RPS15P62841 145 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 CBFBQ13951 182 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 ZNF74Q16587 644 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 VWA2Q5GFL6 755 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 FAM69AQ5T7M9 428 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 ARHGAP40Q5TG30 622 aa11.47□□□□□ -0.57
RAB3IP-201ENST00000247833 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms